YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	RNS3_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFFIFILAL QQLYVQSFAQ DFDFFYFVLQ WPGAYCDSRH SCCYPQTGKP AADFGIHGLW  60
   61 PNYKTGGWPQ NCNPDSRFDD LRVSDLMSDL QREWPTLSCP SNDGMKFWTH EWEKHGTCAE 120
  121 SELDQHDYFE AGLKLKQKAN LLHALTNAGI KPDDKFYEMK DIENTIKQVV GFAPGIECNK 180
  181 DSSHNSQLYQ IYLCVDTSAS KFINCPVMPH GRCDSRVQFP KF

Type	Start	End	Confidence
Signal Peptide	1	19	0.95
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	222	0.99