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Protein Overview: RISB_ARATH

General Information:
Name(s) found: RISB_ARATH [Swiss-Prot]
Description(s) found:
Found 17 descriptions.
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  • 6,7-dimethyl-8-ribityllumazine synthase, chloroplastic OS=Arabidopsis thaliana GN=At2g44050 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 227 amino acids

    Gene Ontology:
    Cellular Component: chloroplast stroma [IDA]
    chloroplast [IDA]
    Biological Process: riboflavin biosynthetic process [IGI][ISS]
    jasmonic acid mediated signaling pathway [IGI]
    Molecular Function: 6,7-dimethyl-8-ribityllumazine synthase activity [IGI][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSLASPPCL RLIPTAHRQL NSRQSSSACY IHGGSSVNKS NNLSFSSSTS GFASPLAVEK  60
   61 ELRSSFVQTA AVRHVTGSLI RGEGLRFAIV VARFNEVVTK LLLEGAIETF KKYSVREEDI 120
  121 EVIWVPGSFE IGVVAQNLGK SGKFHAVLCI GAVIRGDTTH YDAVANSAAS GVLSASINSG 180
  181 VPCIFGVLTC EDMDQALNRS GGKAGNKGAE TALTALEMAS LFEHHLK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..227] PSI-BLAST 35.221849 Lumazine synthase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • 6,7-dimethyl-8-ribityllumazine synthase activity
    		•  5.61825642183907 bayes_pls_golite062009
  • intramolecular transferase activity, transferring acyl groups
    		•  4.02275160603209 bayes_pls_golite062009
  • catalytic activity
    		•  1.78070169551865 bayes_pls_golite062009
  • riboflavin synthase activity
    		•  1.72639804812167 bayes_pls_golite062009
  • isomerase activity
    		•  0.268840799327499 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.53

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle