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View Structure Prediction Details

Protein: RISB_ARATH
Organism: Arabidopsis thaliana
Length: 227 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RISB_ARATH.

Description E-value Query
Range
Subject
Range
gi|26985221 - gi|26985221|gb|AAN86275.1| non-cell-autonomous heat shock cognate protein 70 [Cucurbita maxima]
237.0 [0..14] [213..227]

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Predicted Domain #1
Region A:
Residues: [1-227]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSLASPPCL RLIPTAHRQL NSRQSSSACY IHGGSSVNKS NNLSFSSSTS GFASPLAVEK  60
   61 ELRSSFVQTA AVRHVTGSLI RGEGLRFAIV VARFNEVVTK LLLEGAIETF KKYSVREEDI 120
  121 EVIWVPGSFE IGVVAQNLGK SGKFHAVLCI GAVIRGDTTH YDAVANSAAS GVLSASINSG 180
  181 VPCIFGVLTC EDMDQALNRS GGKAGNKGAE TALTALEMAS LFEHHLK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 35.221849
Match: 1c2yA
Description: Lumazine synthase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
6,7-dimethyl-8-ribityllumazine synthase activity 5.61825642183907 bayes_pls_golite062009
intramolecular transferase activity, transferring acyl groups 4.02275160603209 bayes_pls_golite062009
catalytic activity 1.78070169551865 bayes_pls_golite062009
riboflavin synthase activity 1.72639804812167 bayes_pls_golite062009
isomerase activity 0.268840799327499 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle