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Protein Overview: RIR2A_ARATH

General Information:
Name(s) found: RIR2A_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|9294514|dbj|BAB02776.1| ribonucleotide reductase [Arabidopsis thaliana] [NCBI NR]
  • gi|27735240|sp|P50651.2|RIR2A_ARATH RecName: Full=Ribonucleoside-diphosphate reductase small chain A; AltName: Full=Ribonucleotide reductase small subunit A; AltName: Full=Ribonucleoside-diphosphate reductase R2A subunit; Short=Protein R2at; Short=AtRNR2 [NCBI NR]
  • gi|23505945|gb|AAN28832.1| At3g23580/MDB19_7 [Arabidopsis thaliana] [NCBI NR]
  • gi|15229476|ref|NP_189000.1| RNR2A (RIBONUCLEOTIDE REDUCTASE 2A); ribonucleoside-diphosphate reductase [Arabidopsis thaliana] [NCBI NR]
  • gi|13937232|gb|AAK50108.1|AF372971_1 AT3g23580/MDB19_7 [Arabidopsis thaliana] [NCBI NR]
  • (P50651) Ribonucleoside-diphosphate reductase small chain (EC 1.17.4.1) (Ribonucleotide reductase small subunit) (Ribonucleoside-diphosphate reductase R2 subunit) (Protein R2at) (AtRNR2) [Swiss-Prot]
  • Ribonucleoside-diphosphate reductase small chain A OS=Arabidopsis thaliana GN=RNR2A PE=1 SV=2 [Swiss-Prot]
  • (P50651) Ribonucleoside-diphosphate reductase small chain (EC 1.17.4.1) (Ribonucleotide reductase) (R2 subunit) [athaliana3702.FASTAC.txt]
  • At3g23580/MDB19_7 [Arabidopsis thaliana]gi|9294514|dbj|BAB02776.1| ribonucleotide reductase [Arabidopsis thaliana]gi|13937232|gb|AAK50108.1| AT3g23580/MDB19_7 [Arabidopsis thaliana]gi|15229476|ref|NP_189000.1| ribonucleoside-diphosphate reductase small [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Ribonucleoside-diphosphate reductase small chain [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: RNR2, RNR2A | RNR2/RNR2A (RIBONUCLEOTIDE REDUCTASE 2A); ribonucleoside-diphosphate reductase | chr3:8460268-8462581 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • Ribonucleoside-diphosphate reductase small chain (Ribonucleotide reductase small subunit) (Ribonucleoside-diphosphate reductase R2 subunit) (Protein R2at) (AtRNR2) [nr-271106-contam.fasta]
  • At3g23580/MDB19_7 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • RNR2A; ribonucleoside-diphosphate reductase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • AT3g23580/MDB19_7 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ribonucleotide reductase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: RNR2, RNR2A | ribonucleotide reductase 2A | chr3:8460261-8462574 FORWARD LENGTH=341 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 341 amino acids

    Gene Ontology:
    Cellular Component: ribonucleoside-diphosphate reductase complex [ISS]
    Biological Process: DNA repair [TAS]
    multicellular organismal development [IMP]
    deoxyribonucleoside diphosphate metabolic process [ISS]
    ribonucleotide metabolic process [TAS]
    regulation of cell cycle [IMP]
    Molecular Function: ribonucleoside-diphosphate reductase activity [IDA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSLKEGQGR DMEEGESEEP LLMAQNQRFT MFPIRYKSIW EMYKKAEASF WTAEEVDLST  60
   61 DVQQWEALTD SEKHFISHIL AFFAASDGIV LENLAARFLN DVQVPEARAF YGFQIAMENI 120
  121 HSEMYSLLLE TFIKDSKEKD RLFNAIETIP CISKKAKWCL DWIQSPMSFA VRLVAFACVE 180
  181 GIFFSGSFCA IFWLKKRGLM PGLTFSNELI SRDEGLHCDF ACLLYSLLQK QLPLEKVYQI 240
  241 VHEAVEIETE FVCKALPCDL IGMNSNLMSQ YIQFVADRLL VTLGCERTYK AENPFDWMEF 300
  301 ISLQGKTNFF EKRVGEYQKA SVMSNLQNGN QNYEFTTEED F

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..341] PSI-BLAST 112.0 Ribonucleotide reductase R2

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor
    		•  12.7205287868529 bayes_pls_golite062009
  • ribonucleoside-diphosphate reductase activity
    		•  12.6679910771829 bayes_pls_golite062009
  • oxidoreductase activity, acting on CH or CH2 groups
    		•  12.0783326936172 bayes_pls_golite062009
  • class I ribonucleotide reductase activity
    		•  7.27682621818194 bayes_pls_golite062009
  • binding
    		•  2.38747290927526 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.65619019230429 bayes_pls_golite062009
  • DNA binding
    		•  1.60520679245579 bayes_pls_golite062009
  • protein binding
    		•  1.35559475972187 bayes_pls_golite062009
  • ion binding
    		•  0.214820110894452 bayes_pls_golite062009
  • cation binding
    		•  0.203880627974907 bayes_pls_golite062009
  • metal ion binding
    		•  0.203880627974907 bayes_pls_golite062009
  • catalytic activity
    		•  0.197328811494233 bayes_pls_golite062009
  • transition metal ion binding
    		•  0.168785605665701 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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