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Protein Overview: RCL1_ARATH

General Information:
Name(s) found: RCL1_ARATH [Swiss-Prot]
Description(s) found:
Found 15 descriptions.
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  • Probable RNA 3'-terminal phosphate cyclase-like protein OS=Arabidopsis thaliana GN=At5g22100 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 375 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: RNA-3'-phosphate cyclase activity [ISS]
    catalytic activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVMMKKMKGS QSFRQRLLLS TLSSTPISID EIRADETIPG LRPHEVNLLR LLEIVTDDAV  60
   61 VDINETGTRL KYKPGTIVGG KNLVHSCSLS RSIGYYLEPL LLLGLFGKKP LSIRLKGITN 120
  121 DPRDASVDTF RSTTLNIIKR FGVPAEDLEL KIEARGVAPN GGGEVLLTVP NIKTLSAVHW 180
  181 VEEGMVKKIR GTTFSTRVTS DFEHSMRFAA RGIFNNLLPD VHIFQDHRAG AQAGKSPGYG 240
  241 ISLAAETTTG CFISADTTVS CERPDETGEL DVEKKERSPA EDTGVEVASW LLQEIEKGGV 300
  301 VDSTHQGLLF LLCALSEQDV SKVRVGTLSP YAVETLRNIK EFLGVKFAIK PDPLTGTVIL 360
  361 KCTGSGLINL SRKLS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..375] PSI-BLAST 97.30103 RNA 3'-terminal phosphate cyclase, RPTC, insert domain; RNA 3'-terminal phosphate cyclase, RPTC

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  2.54689525592227 bayes_pls_golite062009
  • transferase activity
    		•  1.7007536630883 bayes_pls_golite062009
  • transferase activity, transferring alkyl or aryl (other than methyl) groups
    		•  1.24131488513793 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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