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Protein Overview: RK123_ARATH

General Information:
Name(s) found: RK123_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|23506071|gb|AAN28895.1| At3g27850/K16N12_7 [Arabidopsis thaliana] [NCBI NR]
  • gi|22530924|gb|AAM96966.1| 50S ribosomal protein L12-C [Arabidopsis thaliana] [NCBI NR]
  • gi|21431811|sp|P36212.2|RK123_ARATH RecName: Full=50S ribosomal protein L12-3, chloroplastic; AltName: Full=CL12-C; Flags: Precursor [NCBI NR]
  • gi|15232276|ref|NP_189423.1| RPL12-C (ribosomal protein l12-c); structural constituent of ribosome [Arabidopsis thaliana] [NCBI NR]
  • gi|14335124|gb|AAK59841.1| AT3g27850/K16N12_7 [Arabidopsis thaliana] [NCBI NR]
  • gi|11994490|dbj|BAB02531.1| 50S ribosomal protein L12-like [Arabidopsis thaliana] [NCBI NR]
  • 50S ribosomal protein L12-3, chloroplastic OS=Arabidopsis thaliana GN=RPL12C PE=2 SV=2 [Swiss-Prot]
  • (P36212) 50S ribosomal protein L12-3, chloroplast precursor (CL12-C) [Swiss-Prot]
  • At3g27850/K16N12_7 [Arabidopsis thaliana]gi|11994490|dbj|BAB02531.1| 50S ribosomal protein L12-like [Arabidopsis thaliana]gi|22530924|gb|AAM96966.1| 50S ribosomal protein L12-C [Arabidopsis thaliana]gi|14335124|gb|AAK59841.1| AT3g27850/K16N12_7 [Arabid [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 50S ribosomal protein L12-3, chloroplast precursor [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: RPL12-C | RPL12-C (RIBOSOMAL PROTEIN L12-C); structural constituent of ribosome | chr3:10326142-10326705 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • AT3g27850/K16N12_7 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • 50S ribosomal protein L12-3, chloroplast precursor (CL12-C) [nr-271106-contam.fasta]
  • 50S ribosomal protein L12-C [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • 50S ribosomal protein L12-like [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At3g27850/K16N12_7 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • RPL12-C (RIBOSOMAL PROTEIN L12-C); structural constituent of ribosome [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: RPL12-C | ribosomal protein L12-C | chr3:10324905-10325468 FORWARD LENGTH=187 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 187 amino acids

    Gene Ontology:
    Cellular Component: chloroplast stroma [IDA]
    chloroplast [IDA]
    large ribosomal subunit [ISS]
    plastid large ribosomal subunit [ISS]
    thylakoid [IDA]
    chloroplast thylakoid membrane [IDA]
    Biological Process: defense response to bacterium [IEP]
    translation [ISS][TAS]
    Molecular Function: structural constituent of ribosome [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASTTLSIAT TIRSSSPLTS ASTHHFLSKP TAIEFPFRLS SSSSHRAINL RPISAVEAPE  60
   61 KIEKIGSEIS SLTLEEARIL VDYLQDKFGV SPLSLAPAAA AVAAPADGGA AAVVEEQTEF 120
  121 DVVINEVPSS SRIAVIKAVR ALTSLALKEA KELIEGLPKK FKEGITKDEA EEAKKTLEEA 180
  181 GAKVSIA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..187] PSI-BLAST 28.154902 No description for 2ftcE was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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