YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	RK123_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASTTLSIAT TIRSSSPLTS ASTHHFLSKP TAIEFPFRLS SSSSHRAINL RPISAVEAPE  60
   61 KIEKIGSEIS SLTLEEARIL VDYLQDKFGV SPLSLAPAAA AVAAPADGGA AAVVEEQTEF 120
  121 DVVINEVPSS SRIAVIKAVR ALTSLALKEA KELIEGLPKK FKEGITKDEA EEAKKTLEEA 180
  181 GAKVSIA

Type	Start	End	Confidence
Signal Peptide	1	21	0.88
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	187	0.99