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Protein Overview: PIF3_ARATH

General Information:
Name(s) found: PIF3_ARATH [Swiss-Prot]
Description(s) found:
Found 20 descriptions.
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  • Transcription factor PIF3 OS=Arabidopsis thaliana GN=PIF3 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 524 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: positive regulation of anthocyanin metabolic process [IMP]
    response to red or far red light [IMP]
    de-etiolation [IMP]
    signal transduction [TAS]
    red or far-red light signaling pathway [IMP]
    gibberellic acid mediated signaling pathway [IMP]
    Molecular Function: DNA binding [IDA][ISS]
    transcription factor activity [ISS]
    protein binding [IPI]
    transcription regulator activity [ISS][TAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLFELFRLT KAKLESAQDR NPSPPVDEVV ELVWENGQIS TQSQSSRSRN IPPPQANSSR  60
   61 AREIGNGSKT TMVDEIPMSV PSLMTGLSQD DDFVPWLNHH PSLDGYCSDF LRDVSSPVTV 120
  121 NEQESDMAVN QTAFPLFQRR KDGNESAPAA SSSQYNGFQS HSLYGSDRAR DLPSQQTNPD 180
  181 RFTQTQEPLI TSNKPSLVNF SHFLRPATFA KTTNNNLHDT KEKSPQSPPN VFQTRVLGAK 240
  241 DSEDKVLNES VASATPKDNQ KACLISEDSC RKDQESEKAV VCSSVGSGNS LDGPSESPSL 300
  301 SLKRKHSNIQ DIDCHSEDVE EESGDGRKEA GPSRTGLGSK RSRSAEVHNL SERRRRDRIN 360
  361 EKMRALQELI PNCNKVDKAS MLDEAIEYLK SLQLQVQIMS MASGYYLPPA VMFPPGMGHY 420
  421 PAAAAAMAMG MGMPYAMGLP DLSRGGSSVN HGPQFQVSGM QQQPVAMGIP RVSGGGIFAG 480
  481 SSTIGNGSTR DLSGSKDQTT TNNNSNLKPI KRKQGSSDQF CGSS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..233] MSA 2.211994 View MSA. No confident structure predictions are available.
    2 View Details [234..333] deduced N/A No confident structure predictions are available.
    3 View Details [334..428] PSI-BLAST 17.39794 Myc prot-oncogene protein
    4 View Details [429..524] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.39

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle