YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: PHYA_ARATH

General Information:
Name(s) found: PHYA_ARATH [Swiss-Prot]
Description(s) found:
Found 17 descriptions.
SHOW ALL
  • Phytochrome A OS=Arabidopsis thaliana GN=PHYA PE=1 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 1122 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    nuclear body [IDA]
    cytoplasm [IDA]
    Biological Process: phototropism [IMP]
    response to arsenic [IMP]
    red light signaling pathway [IMP]
    regulation of transcription, DNA-dependent [ISS]
    response to very low fluence red light stimulus [IMP]
    gravitropism [IMP]
    response to continuous far red light stimulus by the high-irradiance response system [IMP]
    Molecular Function: G-protein coupled photoreceptor activity [ISS]
    red or far-red light photoreceptor activity [TAS]
    protein histidine kinase activity [ISS]
    signal transducer activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGSRPTQSS EGSRRSRHSA RIIAQTTVDA KLHADFEESG SSFDYSTSVR VTGPVVENQP  60
   61 PRSDKVTTTY LHHIQKGKLI QPFGCLLALD EKTFKVIAYS ENASELLTMA SHAVPSVGEH 120
  121 PVLGIGTDIR SLFTAPSASA LQKALGFGDV SLLNPILVHC RTSAKPFYAI IHRVTGSIII 180
  181 DFEPVKPYEV PMTAAGALQS YKLAAKAITR LQSLPSGSME RLCDTMVQEV FELTGYDRVM 240
  241 AYKFHEDDHG EVVSEVTKPG LEPYLGLHYP ATDIPQAARF LFMKNKVRMI VDCNAKHARV 300
  301 LQDEKLSFDL TLCGSTLRAP HSCHLQYMAN MDSIASLVMA VVVNEEDGEG DAPDATTQPQ 360
  361 KRKRLWGLVV CHNTTPRFVP FPLRYACEFL AQVFAIHVNK EVELDNQMVE KNILRTQTLL 420
  421 CDMLMRDAPL GIVSQSPNIM DLVKCDGAAL LYKDKIWKLG TTPSEFHLQE IASWLCEYHM 480
  481 DSTGLSTDSL HDAGFPRALS LGDSVCGMAA VRISSKDMIF WFRSHTAGEV RWGGAKHDPD 540
  541 DRDDARRMHP RSSFKAFLEV VKTRSLPWKD YEMDAIHSLQ LILRNAFKDS ETTDVNTKVI 600
  601 YSKLNDLKID GIQELEAVTS EMVRLIETAT VPILAVDSDG LVNGWNTKIA ELTGLSVDEA 660
  661 IGKHFLTLVE DSSVEIVKRM LENALEGTEE QNVQFEIKTH LSRADAGPIS LVVNACASRD 720
  721 LHENVVGVCF VAHDLTGQKT VMDKFTRIEG DYKAIIQNPN PLIPPIFGTD EFGWCTEWNP 780
  781 AMSKLTGLKR EEVIDKMLLG EVFGTQKSCC RLKNQEAFVN LGIVLNNAVT SQDPEKVSFA 840
  841 FFTRGGKYVE CLLCVSKKLD REGVVTGVFC FLQLASHELQ QALHVQRLAE RTAVKRLKAL 900
  901 AYIKRQIRNP LSGIMFTRKM IEGTELGPEQ RRILQTSALC QKQLSKILDD SDLESIIEGC 960
  961 LDLEMKEFTL NEVLTASTSQ VMMKSNGKSV RITNETGEEV MSDTLYGDSI RLQQVLADFM1020
 1021 LMAVNFTPSG GQLTVSASLR KDQLGRSVHL ANLEIRLTHT GAGIPEFLLN QMFGTEEDVS1080
 1081 EEGLSLMVSR KLVKLMNGDV QYLRQAGKSS FIITAELAAA NK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..609] PSI-BLAST 118.0 No description for 2veaA was found.
    2 View Details [610..723] PSI-BLAST 5.30103 Histidine kinase FixL heme domain
    3 View Details [724..875] PSI-BLAST 4.154902 Crystal Structure of the heme PAS sensor domain of Ec DOS (ferric form)
    4 View Details [876..1122] PSI-BLAST 40.0 Structure of the entire cytoplasmic portion of a sensor histidine kinase protein


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle