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Protein Overview: PLDD1_ARATH

General Information:
Name(s) found: PLDD1_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
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  • Phospholipase D delta OS=Arabidopsis thaliana GN=PLDDELTA PE=1 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 868 amino acids

    Gene Ontology:
    Cellular Component: membrane [IDA]
    vacuole [IDA]
    plasma membrane [IDA]
    Biological Process: response to cold [IEP][IMP]
    phosphatidic acid metabolic process [IMP]
    programmed cell death [IMP]
    Molecular Function: phospholipase D activity [IDA][IMP][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEKVSEDVM LLHGDLDLKI VKARRLPNMD MFSEHLRRLF TACNACARPT DTDDVDPRDK  60
   61 GEFGDKNIRS HRKVITSDPY VTVVVPQATL ARTRVLKNSQ EPLWDEKFNI SIAHPFAYLE 120
  121 FQVKDDDVFG AQIIGTAKIP VRDIASGERI SGWFPVLGAS GKPPKAETAI FIDMKFTPFD 180
  181 QIHSYRCGIA GDPERRGVRR TYFPVRKGSQ VRLYQDAHVM DGTLPAIGLD NGKVYEHGKC 240
  241 WEDICYAISE AHHMIYIVGW SIFHKIKLVR ETKVPRDKDM TLGELLKYKS QEGVRVLLLV 300
  301 WDDKTSHDKF GIKTPGVMGT HDEETRKFFK HSSVICVLSP RYASSKLGLF KQQASPSSSI 360
  361 YIMTVVGTLF THHQKCVLVD TQAVGNNRKV TAFIGGLDLC DGRYDTPEHR ILHDLDTVFK 420
  421 DDFHNPTFPA GTKAPRQPWH DLHCRIDGPA AYDVLINFEQ RWRKATRWKE FSLRLKGKTH 480
  481 WQDDALIRIG RISWILSPVF KFLKDGTSII PEDDPCVWVS KEDDPENWHV QIFRSIDSGS 540
  541 VKGFPKYEDE AEAQHLECAK RLVVDKSIQT AYIQTIRSAQ HFIYIENQYF LGSSYAWPSY 600
  601 RDAGADNLIP MELALKIVSK IRAKERFAVY VVIPLWPEGD PKSGPVQEIL YWQSQTMQMM 660
  661 YDVIAKELKA VQSDAHPLDY LNFYCLGKRE QLPDDMPATN GSVVSDSYNF QRFMIYVHAK 720
  721 GMIVDDEYVL MGSANINQRS MAGTKDTEIA MGAYQPNHTW AHKGRHPRGQ VYGYRMSLWA 780
  781 EHLGKTGDEF VEPSDLECLK KVNTISEENW KRFIDPKFSE LQGHLIKYPL QVDVDGKVSP 840
  841 LPDYETFPDV GGKIIGAHSM ALPDTLTT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..261] PSI-BLAST 28.09691 Synaptogamin I
    2 View Details [262..784] PSI-BLAST 42.30103 Tungstate-inhibited phospholipase D from Streptomyces sp. strain PMF.
    3 View Details [785..868] MSA 1.107985 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  0.762303478549781 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle