Protein Overview: PANC_ARATH

General Information:
Name(s) found:	PANC_ARATH [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|9758883\|dbj\|BAB09437.1\| pantoate-beta-alanine ligase [Arabidopsis thaliana] [NCBI NR] gi\|51968618\|dbj\|BAD43001.1\| pantoate-beta-alanine ligase [Arabidopsis thaliana] [NCBI NR] gi\|20139170\|sp\|Q9FKB3.1\|PANC_ARATH RecName: Full=Pantoate--beta-alanine ligase; AltName: Full=Pantothenate synthetase; AltName: Full=Pantoate-activating enzyme [NCBI NR] gi\|15239721\|ref\|NP_199695.1\| PANC (ARABIDOPSIS HOMOLOG OF BACTERIAL PANC); pantoate-beta-alanine ligase/ protein homodimerization [Arabidopsis thaliana] [NCBI NR] Pantoate--beta-alanine ligase OS=Arabidopsis thaliana GN=At5g48840 PE=1 SV=1 [Swiss-Prot] (Q9FKB3) Pantoate--beta-alanine ligase (EC 6.3.2.1) (Pantothenate synthetase) (Pantoate activating enzyme) [athaliana3702.FASTAC.txt] pantoate-beta-alanine ligase [Arabidopsis thaliana]gi\|51968618\|dbj\|BAD43001.1\| pantoate-beta-alanine ligase [Arabidopsis thaliana]gi\|15239721\|ref\|NP_199695.1\| pantoate-beta-alanine ligase, putative [Arabidopsis thaliana]gi\|20139170\|sp\|Q9FKB3\|PANC_ARATH [nrdb_11152004_Chlamydomonas] Tax_Id=3702 Pantoate--beta-alanine ligase [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta] \| Symbols: PANC \| PANC (Arabidopsis homolog of bacterial panC); pantoate-beta-alanine ligase \| chr5:19821049-19822267 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta] pantoate-beta-alanine ligase [Arabidopsis thaliana] [nr-271106-contam.fasta] Pantoate--beta-alanine ligase (Pantothenate synthetase) (Pantoate-activating enzyme) [nr-271106-contam.fasta] ATP binding / pantoate-beta-alanine ligase [Arabidopsis thaliana] [nr-271106-contam.fasta] \| Symbols: PANC, PTS, ATPTS \| homolog of bacterial PANC \| chr5:19803823-19805041 REVERSE LENGTH=310 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta] Pantoate--beta-alanine ligase OS=Arabidopsis thaliana GN=At5g48840 PE=2 SV=1 [ARATH-contam.fasta]
Organism:	Arabidopsis thaliana
Length:	310 amino acids
Gene Ontology:
Cellular Component:	cytosol [IDA]
Biological Process:	pantothenate biosynthetic process [IMP][ISS] embryonic development ending in seed dormancy [IMP]
Molecular Function:	protein homodimerization activity [IDA] pantoate-beta-alanine ligase activity [IDA][IGI][ISS]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPEVIRDKD SMRKWSRAMR SQGKTIGLVP TMGYLHEGHL SLVRQSLALT DVTVVSIYVN  60
   61 PGQFSPTEDL STYPSDFSGD LTKLAALSGG KVVVFNPKNL YDYGGETKKI NDGGGNGGRV 120
  121 VSCVEEGGLG HETWIRVERL EKGFCGKSRP VFFRGVATIV TKLFNIVEPD VALFGKKDYQ 180
  181 QWRIIQRMVR DLNFGIEIVG SDIAREKDGL AMSSRNVRLS DEERQRALSI SRSLAMAKAS 240
  241 VAEGKTNCAE LKDMIIQQVV GSAGRVDYVE IVDQETLEGV EEIKSGVVIC VAAWFGTVRL 300
  301 IDNIEINVSL

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Searching the YRC Public Image Repository, found results:

Currently showing to of results.

[View Search in the YRC Public Image Repository]

Searching the YRC Public Image Repository, found no results.

Ginzu Version Information

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

Gene Ontology predictions

Term	Confidence	Notes
ligase activity, forming aminoacyl-tRNA and related compounds	5.66762539052452	bayes_pls_golite062009
ligase activity, forming carbon-oxygen bonds	5.66762539052452	bayes_pls_golite062009
aminoacyl-tRNA ligase activity	5.65398773296369	bayes_pls_golite062009
ligase activity	4.61911329839139	bayes_pls_golite062009
pantoate-beta-alanine ligase activity	2.65346774278189	bayes_pls_golite062009
catalytic activity	2.37674226834122	bayes_pls_golite062009
glutamate-tRNA ligase activity	2.21467185575886	bayes_pls_golite062009
nucleic acid binding	1.64840822019417	bayes_pls_golite062009
methionine-tRNA ligase activity	1.59260025359667	bayes_pls_golite062009
tyrosine-tRNA ligase activity	1.47110858685627	bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups	1.38579849961344	bayes_pls_golite062009
pantetheine-phosphate adenylyltransferase activity	1.25694296916214	bayes_pls_golite062009
binding	1.11291710031577	bayes_pls_golite062009
adenylyltransferase activity	1.08055019963499	bayes_pls_golite062009
transferase activity	1.06817715108743	bayes_pls_golite062009
tryptophan-tRNA ligase activity	0.725178047574893	bayes_pls_golite062009
arginine-tRNA ligase activity	0.722005407734432	bayes_pls_golite062009
nicotinate-nucleotide adenylyltransferase activity	0.692499879958128	bayes_pls_golite062009
nicotinamide-nucleotide adenylyltransferase activity	0.567882194154248	bayes_pls_golite062009
nucleotidyltransferase activity	0.564359271862248	bayes_pls_golite062009
cysteine-tRNA ligase activity	0.430902479559327	bayes_pls_golite062009

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.71

Source: Reynolds et al. (2008)

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..310]	PSI-BLAST	104.0	Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC)

Protein Overview: PANC_ARATH

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: