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Protein Overview: MSH7_ARATH

General Information:
Name(s) found: MSH7_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|9294039|dbj|BAB01996.1| DNA repair protein MutS [Arabidopsis thaliana] [NCBI NR]
  • gi|3757550|emb|CAA07685.1| Msh6-2 protein [Arabidopsis thaliana] [NCBI NR]
  • gi|30687514|ref|NP_850630.1| MSH7 (MUTS HOMOLOG 7); ATP binding / damaged DNA binding / mismatched DNA binding [Arabidopsis thaliana] [NCBI NR]
  • gi|12643849|sp|Q9SMV7.1|MSH7_ARATH RecName: Full=DNA mismatch repair protein Msh6-2; Short=AtMsh6-2; AltName: Full=MutS homolog 7 [NCBI NR]
  • DNA mismatch repair protein MSH7 OS=Arabidopsis thaliana GN=MSH7 PE=1 SV=1 [Swiss-Prot]
  • (Q9SMV7) DNA mismatch repair protein MSH6-2 (AtMsh6-2) (MutS homolog 7) [athaliana3702.FASTAC.txt]
  • DNA repair protein MutS [Arabidopsis thaliana]gi|3757550|emb|CAA07685.1| Msh6-2 protein [Arabidopsis thaliana]gi|30687514|ref|NP_850630.1| DNA mismatch repair protein MSH6-2 (MSH7) [Arabidopsis thaliana]gi|12643849|sp|Q9SMV7|MSH7_ARATH DNA mismatch rep [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 DNA mismatch repair protein MSH6-2 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: MSH6-2, MSH7 | MSH7 (MUTS HOMOLOG 6-2); ATP binding / damaged DNA binding | chr3:8912425-8918093 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • Msh6-2 protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • DNA mismatch repair protein MSH6-2 (AtMsh6-2) (MutS homolog 7) [nr-271106-contam.fasta]
  • ATP binding / DNA binding / damaged DNA binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • DNA repair protein MutS [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • MSH7 (MUTS HOMOLOG 7); ATP binding / damaged DNA binding / mismatched DNA binding [Arabidopsis thaliana] [NCBI-RefSeq_Human_na_04-23-2010_reversed.fasta]
  • | Symbols: MSH7, MSH6-2, ATMSH7 | MUTS homolog 7 | chr3:8912418-8918086 REVERSE LENGTH=1109 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 1109 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: mismatch repair [IEA][ISS]
    Molecular Function: ATP binding [IEA][ISS]
    mismatched DNA binding [IEA]
    damaged DNA binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRQRSILSF FQKPTAATTK GLVSGDAASG GGGSGGPRFN VKEGDAKGDA SVRFAVSKSV  60
   61 DEVRGTDTPP EKVPRRVLPS GFKPAESAGD ASSLFSNIMH KFVKVDDRDC SGERSREDVV 120
  121 PLNDSSLCMK ANDVIPQFRS NNGKTQERNH AFSFSGRAEL RSVEDIGVDG DVPGPETPGM 180
  181 RPRASRLKRV LEDEMTFKED KVPVLDSNKR LKMLQDPVCG EKKEVNEGTK FEWLESSRIR 240
  241 DANRRRPDDP LYDRKTLHIP PDVFKKMSAS QKQYWSVKSE YMDIVLFFKV GKFYELYELD 300
  301 AELGHKELDW KMTMSGVGKC RQVGISESGI DEAVQKLLAR GYKVGRIEQL ETSDQAKARG 360
  361 ANTIIPRKLV QVLTPSTASE GNIGPDAVHL LAIKEIKMEL QKCSTVYGFA FVDCAALRFW 420
  421 VGSISDDASC AALGALLMQV SPKEVLYDSK GLSREAQKAL RKYTLTGSTA VQLAPVPQVM 480
  481 GDTDAAGVRN IIESNGYFKG SSESWNCAVD GLNECDVALS ALGELINHLS RLKLEDVLKH 540
  541 GDIFPYQVYR GCLRIDGQTM VNLEIFNNSC DGGPSGTLYK YLDNCVSPTG KRLLRNWICH 600
  601 PLKDVESINK RLDVVEEFTA NSESMQITGQ YLHKLPDLER LLGRIKSSVR SSASVLPALL 660
  661 GKKVLKQRVK AFGQIVKGFR SGIDLLLALQ KESNMMSLLY KLCKLPILVG KSGLELFLSQ 720
  721 FEAAIDSDFP NYQNQDVTDE NAETLTILIE LFIERATQWS EVIHTISCLD VLRSFAIAAS 780
  781 LSAGSMARPV IFPESEATDQ NQKTKGPILK IQGLWHPFAV AADGQLPVPN DILLGEARRS 840
  841 SGSIHPRSLL LTGPNMGGKS TLLRATCLAV IFAQLGCYVP CESCEISLVD TIFTRLGASD 900
  901 RIMTGESTFL VECTETASVL QNATQDSLVI LDELGRGTST FDGYAIAYSV FRHLVEKVQC 960
  961 RMLFATHYHP LTKEFASHPR VTSKHMACAF KSRSDYQPRG CDQDLVFLYR LTEGACPESY1020
 1021 GLQVALMAGI PNQVVETASG AAQAMKRSIG ENFKSSELRS EFSSLHEDWL KSLVGISRVA1080
 1081 HNNAPIGEDD YDTLFCLWHE IKSSYCVPK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..203] MSA 10.270997 View MSA. No confident structure predictions are available.
    2 View Details [204..259] deduced N/A No confident structure predictions are available.
    3 View Details [260..1109] PSI-BLAST 1000.0 Crystal Structure of E. coli DNA Mismatch Repair enzyme MutS, E38T mutant, in complex with a G.T mismatch


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.68

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle