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Protein Overview: LOX1_ARATH

General Information:
Name(s) found: LOX1_ARATH [Swiss-Prot]
Description(s) found:
Found 20 descriptions.
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  • Linoleate 9S-lipoxygenase 1 OS=Arabidopsis thaliana GN=LOX1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 859 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: root development [IMP]
    defense response to bacterium, incompatible interaction [IEP]
    response to abscisic acid stimulus [IEP]
    jasmonic acid biosynthetic process [TAS]
    response to wounding [TAS]
    response to jasmonic acid stimulus [IEP]
    membrane disassembly [TAS]
    defense response [TAS]
    growth [TAS]
    Molecular Function: lipoxygenase activity [IMP][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFGELRDLLT GGGNETTTKK VKGTVVLMKK NVLDFNDFNA SFLDRLHEFL GNKITLRLVS  60
   61 SDVTDSENGS KGKLGKAAHL EDWITTITSL TAGESAFKVT FDYETDFGYP GAFLIRNSHF 120
  121 SEFLLKSLTL EDVPGHGRVH YICNSWIYPA KHYTTDRVFF SNKTYLPHET PATLLKYREE 180
  181 ELVSLRGTGE GELKEWDRVY DYAYYNDLGV PPKNPRPVLG GTQEYPYPRR GRTGRKPTKE 240
  241 DPQTESRLPI TSSLDIYVPR DERFGHLKMS DFLAYALKAI AQFIQPALEA VFDDTPKEFD 300
  301 SFEDVLKIYE EGIDLPNQAL IDSIVKNIPL EMLKEIFRTD GQKFLKFPVP QVIKEDKTAW 360
  361 RTDEEFAREM LAGLNPVVIQ LLKEFPPKSK LDSESYGNQN STITKSHIEH NLDGLTVEEA 420
  421 LEKERLFILD HHDTLMPYLG RVNTTTTKTY ASRTLLFLKD DGTLKPLVIE LSLPHPNGDK 480
  481 FGAVSEVYTP GEGVYDSLWQ LAKAFVGVND SGNHQLISHW MQTHASIEPF VIATNRQLSV 540
  541 LHPVFKLLEP HFRDTMNINA LARQILINGG GIFEITVFPS KYAMEMSSFI YKNHWTFPDQ 600
  601 ALPAELKKRG MAVEDPEAPH GLRLRIKDYP YAVDGLEVWY AIESWVRDYI FLFYKIEEDI 660
  661 QTDTELQAWW KEVREEGHGD KKSEPWWPKM QTREELVESC TIIIWVASAL HAAVNFGQYP 720
  721 VAGYLPNRPT ISRQYMPKEN TPEFEELEKN PDKVFLKTIT AQLQTLLGIS LIEILSTHSS 780
  781 DEVYLGQRDS KEWAAEKEAL EAFEKFGEKV KEIEKNIDER NDDETLKNRT GLVKMPYTLL 840
  841 FPSSEGGVTG RGIPNSVSI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..859] PSI-BLAST 1000.0 Lipoxigenase, C-terminal domain; Plant lipoxigenase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • arachidonate 12-lipoxygenase activity
    		•  2.97198477063857 bayes_pls_golite062009
  • hepoxilin-epoxide hydrolase activity
    		•  2.06608775760905 bayes_pls_golite062009
  • protein binding
    		•  1.53930087292625 bayes_pls_golite062009
  • oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
    		•  1.39829306055845 bayes_pls_golite062009
  • oxidoreductase activity, acting on single donors with incorporation of molecular oxygen
    		•  1.32313076160919 bayes_pls_golite062009
  • binding
    		•  1.2577136186178 bayes_pls_golite062009
  • dioxygenase activity
    		•  0.515054165229715 bayes_pls_golite062009
  • arachidonate 15-lipoxygenase activity
    		•  0.440928568408097 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle