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Protein Overview: KPPR_ARATH

General Information:
Name(s) found: KPPR_ARATH [Swiss-Prot]
Description(s) found:
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  • pir||S16583 phosphoribulokinase (EC 2.7.1.19) precursor - Arabidopsis thaliana [NCBI NR]
  • gi|23197622|gb|AAN15338.1| phosphoribulokinase precursor [Arabidopsis thaliana] [NCBI NR]
  • gi|22135952|gb|AAM91558.1| phosphoribulokinase precursor [Arabidopsis thaliana] [NCBI NR]
  • gi|21536810|gb|AAM61142.1| phosphoribulokinase precursor [Arabidopsis thaliana] [NCBI NR]
  • gi|16441|emb|CAA41155.1| Ribulose-5-phosphate kinase [Arabidopsis thaliana] [NCBI NR]
  • gi|15222551|ref|NP_174486.1| PRK (PHOSPHORIBULOKINASE); ATP binding / phosphoribulokinase/ protein binding [Arabidopsis thaliana] [NCBI NR]
  • gi|14994283|gb|AAK73276.1| Unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|125576|sp|P25697.1|KPPR_ARATH RecName: Full=Phosphoribulokinase, chloroplastic; Short=PRKase; Short=PRK; AltName: Full=Phosphopentokinase; Flags: Precursor [NCBI NR]
  • gi|12321472|gb|AAG50797.1|AC074309_14 phosphoribulokinase precursor [Arabidopsis thaliana] [NCBI NR]
  • Phosphoribulokinase, chloroplastic OS=Arabidopsis thaliana GN=At1g32060 PE=2 SV=1 [Swiss-Prot]
  • (P25697) Phosphoribulokinase, chloroplast precursor (EC 2.7.1.19) (Phosphopentokinase) (PRKASE) (PRK) [athaliana3702.FASTAC.txt]
  • phosphoribulokinase precursor [Arabidopsis thaliana]gi|22135952|gb|AAM91558.1| phosphoribulokinase precursor [Arabidopsis thaliana]gi|21536810|gb|AAM61142.1| phosphoribulokinase precursor [Arabidopsis thaliana]gi|16441|emb|CAA41155.1| Ribulose-5-phosph [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Phosphoribulokinase, chloroplast precursor [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: PRK | PRK (PHOSPHORIBULOKINASE); ATP binding / phosphoribulokinase/ protein binding | chr1:11532648-11534386 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • Ribulose-5-phosphate kinase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • phosphoribulokinase precursor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ATP binding / kinase/ phosphoribulokinase/ uridine kinase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Phosphoribulokinase, chloroplast precursor (Phosphopentokinase) (PRKase) (PRK) [nr-271106-contam.fasta]
  • Unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: PRK | phosphoribulokinase | chr1:11532668-11534406 FORWARD LENGTH=395 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Phosphoribulokinase, chloroplastic OS=Arabidopsis thaliana GN=At1g32060 PE=1 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 395 amino acids

    Gene Ontology:
    Cellular Component: chloroplast stroma [IDA]
    chloroplast [IDA]
    membrane [IDA]
    apoplast [IDA]
    stromule [IDA]
    chloroplast envelope [IDA]
    chloroplast thylakoid membrane [IDA]
    thylakoid [IDA]
    Biological Process: response to cold [IEP]
    biosynthetic process [ISS]
    defense response to bacterium [IEP]
    Molecular Function: ATP binding [ISS]
    protein binding [IPI]
    phosphoribulokinase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVSTIYSTQ ALNSTHFLTS SSSSKQVFLY RRQPQTNRRF NTLITCAQET IVIGLAADSG  60
   61 CGKSTFMRRL TSVFGGAAKP PKGGNPDSNT LISDTTTVIC LDDYHSLDRY GRKEQKVTAL 120
  121 DPRANDFDLM YEQVKALKNG IAVEKPIYNH VTGLLDPPEL IQPPKILVIE GLHPMFDERV 180
  181 RDLLDFSIYL DISNEVKFAW KIQRDMAERG HSLESIKASI EARKPDFDAF IDPQKQYADA 240
  241 VIEVLPTTLI PDDNEGKVLR VRLIMKEGVK YFSPVYLFDE GSTISWIPCG RKLTCSYPGI 300
  301 KFNYEPDSYF DHEVSVLEMD GQFDRLDELI YVESHLSNLS TKFYGEVTQQ MLKHADFPGS 360
  361 NNGTGLFQTI VGLKIRDLYE QLIANKATAR AEAKA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..264] PSI-BLAST 35.0 Crystal structure of human uridine-cytidine kinase 2 complexed with a feedback-inhibitor, CTP
    2 View Details [265..395] PSI-BLAST 15.39794 Uracil PRTase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • nucleobase, nucleoside, nucleotide kinase activity
    		•  2.98849022091298 bayes_pls_golite062009
  • nucleotide kinase activity
    		•  2.24094813695083 bayes_pls_golite062009
  • phosphotransferase activity, phosphate group as acceptor
    		•  1.96697952975573 bayes_pls_golite062009
  • kinase activity
    		•  1.34679666271693 bayes_pls_golite062009
  • catalytic activity
    		•  1.00104173493322 bayes_pls_golite062009
  • binding
    		•  0.995117091387923 bayes_pls_golite062009
  • hydrolase activity
    		•  0.247702859990584 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle