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Protein Overview: IF5Z_ARATH

General Information:
Name(s) found: IF5Z_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|6573756|gb|AAF17676.1|AC009243_3 F28K19.5 [Arabidopsis thaliana] [NCBI NR]
  • gi|28380089|sp|Q9S825.1|IF5Z_ARATH RecName: Full=Probable eukaryotic translation initiation factor 5-2; Short=eIF-5 2 [NCBI NR]
  • gi|25084097|gb|AAN72174.1| putative eukaryotic translation initiation factor 5 [Arabidopsis thaliana] [NCBI NR]
  • gi|21387159|gb|AAM47983.1| putative eukaryotic translation initiation factor 5 [Arabidopsis thaliana] [NCBI NR]
  • gi|17473619|gb|AAL38273.1| putative eukaryotic translation initiation factor 5 [Arabidopsis thaliana] [NCBI NR]
  • gi|17065236|gb|AAL32772.1| putative eukaryotic translation initiation factor 5 [Arabidopsis thaliana] [NCBI NR]
  • gi|15218142|ref|NP_177907.1| eukaryotic translation initiation factor 5, putative / eIF-5, putative [Arabidopsis thaliana] [NCBI NR]
  • gi|12323296|gb|AAG51628.1|AC012193_10 putative eukaryotic translation initiation factor 5; 76444-77757 [Arabidopsis thaliana] [NCBI NR]
  • Probable eukaryotic translation initiation factor 5-2 OS=Arabidopsis thaliana GN=At1g77840 PE=2 SV=1 [Swiss-Prot]
  • (Q9S825) Probable eukaryotic translation initiation factor 5-2 (eIF-5 2) [athaliana3702.FASTAC.txt]
  • putative eukaryotic translation initiation factor 5 [Arabidopsis thaliana]gi|17473619|gb|AAL38273.1| putative eukaryotic translation initiation factor 5 [Arabidopsis thaliana]gi|17065236|gb|AAL32772.1| putative eukaryotic translation initiation factor 5 [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Probable eukaryotic translation initiation factor 5-2 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | eukaryotic translation initiation factor 5, putative / eIF-5, putative | chr1:29273981-29275294 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative eukaryotic translation initiation factor 5 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • F28K19.5 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Probable eukaryotic translation initiation factor 5-2 (eIF-5 2) [nr-271106-contam.fasta]
  • translation initiation factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative eukaryotic translation initiation factor 5; 76444-77757 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Translation initiation factor IF2/IF5 | chr1:29269087-29270400 FORWARD LENGTH=437 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 437 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    cytoplasm [IDA]
    Biological Process: regulation of translational initiation [ISS]
    translational initiation [IEA]
    Molecular Function: translation initiation factor activity [IEA][ISS]
    binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALQNIGASN RNDAFYRYKM PKMVTKTEGK GNGIKTNIIN NVEIAKALAR PPSYTTKYFG  60
   61 CELGAQSKFD EKTGTSLVNG AHNTSKLAGL LENFIKKFVQ CYGCGNPETE IIITKTQMVN 120
  121 LKCAACGFIS EVDMRDKLTN FILKNPPEQK KVSKDKKAMR KAEKERLKEG ELADEEQRKL 180
  181 KAKKKALSNG KDSKTSKNHS SDEDISPKHD ENALEVDEDE DDDDGVEWQT DTSREAAEKR 240
  241 MMEQLSAKTA EMVMLSAMEV EEKKAPKSKS NGNVVKTENP PPQEKNLVQD MKEYLKKGSP 300
  301 ISALKSFISS LSEPPQDIMD ALFNALFDGV GKGFAKEVTK KKNYLAAAAT MQEDGSQMHL 360
  361 LNSIGTFCGK NGNEEALKEV ALVLKALYDQ DIIEEEVVLD WYEKGLTGAD KSSPVWKNVK 420
  421 PFVEWLQSAE SESEEED

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..154] PSI-BLAST 61.69897 No description for 2g2kA was found.
    2 View Details [155..437] PSI-BLAST 26.69897 C-terminal portion of human eIF4GI


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle