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View Structure Prediction Details

Protein: IF5Z_ARATH
Organism: Arabidopsis thaliana
Length: 437 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IF5Z_ARATH.

Description E-value Query
Range
Subject
Range
gi|114188369, gi... - gi|115443386|ref|XP_001218500.1| hypothetical protein ATEG_09878 [Aspergillus terreus NIH2624], gi|1...
365.0 [0..1] [429..1]

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Predicted Domain #1
Region A:
Residues: [1-154]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALQNIGASN RNDAFYRYKM PKMVTKTEGK GNGIKTNIIN NVEIAKALAR PPSYTTKYFG  60
   61 CELGAQSKFD EKTGTSLVNG AHNTSKLAGL LENFIKKFVQ CYGCGNPETE IIITKTQMVN 120
  121 LKCAACGFIS EVDMRDKLTN FILKNPPEQK KVSK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 61.69897
Match: 2g2kA
Description: No description for 2g2kA was found.

Predicted Domain #2
Region A:
Residues: [155-437]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DKKAMRKAEK ERLKEGELAD EEQRKLKAKK KALSNGKDSK TSKNHSSDED ISPKHDENAL  60
   61 EVDEDEDDDD GVEWQTDTSR EAAEKRMMEQ LSAKTAEMVM LSAMEVEEKK APKSKSNGNV 120
  121 VKTENPPPQE KNLVQDMKEY LKKGSPISAL KSFISSLSEP PQDIMDALFN ALFDGVGKGF 180
  181 AKEVTKKKNY LAAAATMQED GSQMHLLNSI GTFCGKNGNE EALKEVALVL KALYDQDIIE 240
  241 EEVVLDWYEK GLTGADKSSP VWKNVKPFVE WLQSAESESE EED

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 26.69897
Match: 1ug3A
Description: C-terminal portion of human eIF4GI
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle