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Protein Overview: HFB2B_ARATH

General Information:
Name(s) found: HFB2B_ARATH [Swiss-Prot]
Description(s) found:
Found 17 descriptions.
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  • Heat stress transcription factor B-2b OS=Arabidopsis thaliana GN=HSFB2B PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 377 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    Biological Process: response to chitin [IEP]
    Molecular Function: transcription factor activity [ISS]
    transcription repressor activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGEQTGETP TVAGVGGGGA GCSAGNSGGS SGCGAGGGGG GSGGGGGGGG DSQRSIPTPF  60
   61 LTKTYQLVED PVYDELISWN EDGTTFIVWR PAEFARDLLP KYFKHNNFSS FVRQLNTYGF 120
  121 RKVVPDRWEF SNDCFKRGEK ILLRDIQRRK ISQPAMAAAA AAAAAAVAAS AVTVAAVPVV 180
  181 AHIVSPSNSG EEQVISSNSS PAAAAAAIGG VVGGGSLQRT TSCTTAPELV EENERLRKDN 240
  241 ERLRKEMTKL KGLYANIYTL MANFTPGQED CAHLLPEGKP LDLLPERQEM SEAIMASEIE 300
  301 TGIGLKLGED LTPRLFGVSI GVKRARREEE LGAAEEEDDD RREAAAQEGE QSSDVKAEPM 360
  361 EENNSGNHNG SWLELGK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..149] PSI-BLAST 33.69897 SOLUTION STRUCTURE OF THE DNA-BINDING DOMAIN OF DROSOPHILA HEAT SHOCK TRANSCRIPTION FACTOR
    2 View Details [150..217] deduced N/A No confident structure predictions are available.
    3 View Details [218..377] MSA 2.180993 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.835523092977445 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.4843036104266 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.37117756729668 bayes_pls_golite062009
  • DNA binding
    		•  0.3118855114645 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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