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Protein Overview: HSFB1_ARATH

General Information:
Name(s) found: HSFB1_ARATH [Swiss-Prot]
Description(s) found:
Found 19 descriptions.
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  • Heat stress transcription factor B-1 OS=Arabidopsis thaliana GN=HSFB1 PE=2 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 284 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    Biological Process: response to heat [IEP]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS]
    transcription repressor activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAVTAAQRS VPAPFLSKTY QLVDDHSTDD VVSWNEEGTA FVVWKTAEFA KDLLPQYFKH  60
   61 NNFSSFIRQL NTYGFRKTVP DKWEFANDYF RRGGEDLLTD IRRRKSVIAS TAGKCVVVGS 120
  121 PSESNSGGGD DHGSSSTSSP GSSKNPGSVE NMVADLSGEN EKLKRENNNL SSELAAAKKQ 180
  181 RDELVTFLTG HLKVRPEQID KMIKGGKFKP VESDEESECE GCDGGGGAEE GVGEGLKLFG 240
  241 VWLKGERKKR DRDEKNYVVS GSRMTEIKNV DFHAPLWKSS KVCN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..115] PSI-BLAST 33.221849 SOLUTION STRUCTURE OF THE DNA-BINDING DOMAIN OF DROSOPHILA HEAT SHOCK TRANSCRIPTION FACTOR
    2 View Details [116..208] FFAS03 1.0 C/ebp beta
    3 View Details [209..284] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.835523092977445 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.4843036104266 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.37117756729668 bayes_pls_golite062009
  • DNA binding
    		•  0.3118855114645 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle