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Protein Overview: GLR12_ARATH

General Information:
Name(s) found: GLR12_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|8777370|dbj|BAA96960.1| ligand-gated ion channel protein-like; glutamate receptor-like [Arabidopsis thaliana] [NCBI NR]
  • gi|41017233|sp|Q9LV72.1|GLR12_ARATH RecName: Full=Glutamate receptor 1.2; AltName: Full=Ligand-gated ion channel 1.2; Flags: Precursor [NCBI NR]
  • gi|21684640|gb|AAL61993.1| putative glutamate receptor protein GLR1.2a [Arabidopsis thaliana] [NCBI NR]
  • gi|15238964|ref|NP_199651.1| ATGLR1.2; intracellular ligand-gated ion channel [Arabidopsis thaliana] [NCBI NR]
  • (Q9LV72) Glutamate receptor 1.2 precursor (Ligand-gated ion channel 1.2) [Swiss-Prot]
  • Glutamate receptor 1.2 OS=Arabidopsis thaliana GN=GLR1.2 PE=2 SV=1 [Swiss-Prot]
  • ligand-gated ion channel protein-like; glutamate receptor-like [Arabidopsis thaliana]gi|21684640|gb|AAL61993.1| putative glutamate receptor protein GLR1.2a [Arabidopsis thaliana]gi|41017233|sp|Q9LV72|GR12_ARATH Glutamate receptor 1.2 precursor (Ligand-g [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Splice Isoform 1 of Glutamate receptor 1.2 precursor [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: GLR1.2, ATGLR1.2 | ATGLR1.2 (Arabidopsis thaliana glutamate receptor 1.2) | chr5:19633470-19636472 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • ligand-gated ion channel protein-like; glutamate receptor-like [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ATGLR1.2 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Glutamate receptor 1.2 precursor (Ligand-gated ion channel 1.2) [nr-271106-contam.fasta]
  • putative glutamate receptor protein GLR1.2a [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ATGLR1.2, GLR1.2 | Glutamate receptor family protein | chr5:19616244-19619246 FORWARD LENGTH=867 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 867 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEA]
    endomembrane system [IEA]
    Biological Process: response to light stimulus [NAS]
    cellular calcium ion homeostasis [NAS]
    Molecular Function: intracellular ligand-gated ion channel activity [ISS]
    protein binding [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRICIQTPI LLSFLLVLLF FISNCFASSQ NNDDDKRIRV RVGLVLDLGS VEGKIVRSSV  60
   61 SMALSDFYDN HNDYKTRLSL LVRDSHGEPL LALDSVVDLL QTEGVQAIIG GNSLLEAKLL 120
  121 AELGEKARVP VISLNSPMSL SLSKYTHLIQ ATHNSASEVK GITAFLHGFD WNSVALVLED 180
  181 HDDWRESMHF MVDHFHENNV HVQSKVAFSV TSSEDSLMDR LRELKDLGTT VFVVHLSEVI 240
  241 ATRLFPCAEK LGMMGEGFAW ILTSRSMSSF HDQFIDDLTK EAMEGVVGFK SYIPMSKELH 300
  301 NFTLRWRKTL PVEEVTGSEI TRLSISGVWA HDVAWSLASA AEVTRMPTVT STLLEAIKES 360
  361 RFKGLSGNFQ LDDMKLLSDK FEIVNMIGSG ERRVGFWNSN GSFSNRRQLS STHDNLETII 420
  421 WPGGSAQSPK GRSLRESGRK KLRVLVTSSN RFPRLMKVET DPITHEITIV EGFCIEVFQA 480
  481 SIAPFNYEVE YIRWLNGTNY TKLAYALHSQ KDKYDAAVGD ITITSDRSMY VDFTLPYTEM 540
  541 GLGIVAAKER SMWVFFQPLT PNLWITSAAF FVLTGIIVWL IERAENKEFQ GSWPQQIGVV 600
  601 IWFGFSTLVY AHREKLQHNL SRFVVTVWVF AVLILVTSYT ATLTSMMTVQ QIRFNANEDY 660
  661 VGHLSGSLIA NAALTNSSLR AMRLLGLNTS EDYAQALMNK SVSYIVSELP YLKILLGENP 720
  721 GHFLMVKTQS TTNGFGFMFQ KGSELAPNVS REIAKLRTSE RLNEMERRWF DKQLPYTTDD 780
  781 TSNPITLYRF RGLFMITGVS FAFALAVLLI LWLRERWEIL VNSVNIYFSQ RLRHFRILFT 840
  841 RTIHPSPLGL DNPIGENAVQ MAQRNRR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..558] PSI-BLAST 53.154902 No description for 2e4uA was found.
    2 View Details [559..867] PSI-BLAST 26.0 Structure of the Kainate Receptor Subunit GluR6 Agonist Binding Domain Complexed with Domoic Acid


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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