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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GLR12_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRICIQTPI LLSFLLVLLF FISNCFASSQ NNDDDKRIRV RVGLVLDLGS VEGKIVRSSV  60
   61 SMALSDFYDN HNDYKTRLSL LVRDSHGEPL LALDSVVDLL QTEGVQAIIG GNSLLEAKLL 120
  121 AELGEKARVP VISLNSPMSL SLSKYTHLIQ ATHNSASEVK GITAFLHGFD WNSVALVLED 180
  181 HDDWRESMHF MVDHFHENNV HVQSKVAFSV TSSEDSLMDR LRELKDLGTT VFVVHLSEVI 240
  241 ATRLFPCAEK LGMMGEGFAW ILTSRSMSSF HDQFIDDLTK EAMEGVVGFK SYIPMSKELH 300
  301 NFTLRWRKTL PVEEVTGSEI TRLSISGVWA HDVAWSLASA AEVTRMPTVT STLLEAIKES 360
  361 RFKGLSGNFQ LDDMKLLSDK FEIVNMIGSG ERRVGFWNSN GSFSNRRQLS STHDNLETII 420
  421 WPGGSAQSPK GRSLRESGRK KLRVLVTSSN RFPRLMKVET DPITHEITIV EGFCIEVFQA 480
  481 SIAPFNYEVE YIRWLNGTNY TKLAYALHSQ KDKYDAAVGD ITITSDRSMY VDFTLPYTEM 540
  541 GLGIVAAKER SMWVFFQPLT PNLWITSAAF FVLTGIIVWL IERAENKEFQ GSWPQQIGVV 600
  601 IWFGFSTLVY AHREKLQHNL SRFVVTVWVF AVLILVTSYT ATLTSMMTVQ QIRFNANEDY 660
  661 VGHLSGSLIA NAALTNSSLR AMRLLGLNTS EDYAQALMNK SVSYIVSELP YLKILLGENP 720
  721 GHFLMVKTQS TTNGFGFMFQ KGSELAPNVS REIAKLRTSE RLNEMERRWF DKQLPYTTDD 780
  781 TSNPITLYRF RGLFMITGVS FAFALAVLLI LWLRERWEIL VNSVNIYFSQ RLRHFRILFT 840
  841 RTIHPSPLGL DNPIGENAVQ MAQRNRR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle