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Protein Overview: GCSH1_ARATH

General Information:
Name(s) found: GCSH1_ARATH [Swiss-Prot]
Description(s) found:
Found 25 descriptions.
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  • Glycine cleavage system H protein 1, mitochondrial OS=Arabidopsis thaliana GN=GDH1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 165 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    chloroplast [IDA]
    mitochondrion [TAS]
    thylakoid [IDA]
    Biological Process: photorespiration [TAS]
    glycine decarboxylation via glycine cleavage system [TAS]
    Molecular Function: glycine dehydrogenase (decarboxylating) activity [TAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALRMWASST ANALKLSSSV SKSHLSPFSF SRCFSTVLEG LKYANSHEWV KHEGSVATIG  60
   61 ITAHAQDHLG EVVFVELPED NTSVSKEKSF GAVESVKATS EILSPISGEI IEVNKKLTES 120
  121 PGLINSSPYE DGWMIKVKPS SPAELESLMG PKEYTKFCEE EDAAH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..165] PSI-BLAST 38.0 Protein H of glycine cleavage system

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • aminomethyltransferase activity
    		•  7.15454688996532 bayes_pls_golite062009
  • glycine dehydrogenase (decarboxylating) activity
    		•  6.56199545993139 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor
    		•  6.56199545993139 bayes_pls_golite062009
  • acetyl-CoA carboxylase activity
    		•  2.30995434688093 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors
    		•  1.93346020821958 bayes_pls_golite062009
  • CoA carboxylase activity
    		•  1.92420834470262 bayes_pls_golite062009
  • ligase activity, forming carbon-carbon bonds
    		•  1.62422217856347 bayes_pls_golite062009
  • catalytic activity
    		•  1.39099902011318 bayes_pls_golite062009
  • ligase activity
    		•  0.56894584941056 bayes_pls_golite062009
  • binding
    		•  0.53993697366231 bayes_pls_golite062009
  • protein binding
    		•  0.396415237274882 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.55

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle