YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: ERF1Z_ARATH

General Information:
Name(s) found: ERF1Z_ARATH [Swiss-Prot]
Description(s) found:
SHOW ONLY BEST
  • gi|549010|sp|P35614.1|ERF1Z_ARATH RecName: Full=Eukaryotic peptide chain release factor subunit 1-3; Short=Eukaryotic release factor 1-3; Short=eRF1-3; AltName: Full=Omnipotent suppressor protein 1 homolog 3; Short=SUP1 homolog 3 [NCBI NR]
  • gi|42565216|ref|NP_189295.3| ERF1-3 (eukaryotic release factor 1-3); translation release factor [Arabidopsis thaliana] [NCBI NR]
  • pir||S31328 omnipotent suppressor protein SUP1 homolog (clone G18) - Arabidopsis thaliana [NCBI NR]
  • gi|21435997|gb|AAM51576.1| At3g26618/MFE16.15 [Arabidopsis thaliana] [NCBI NR]
  • gi|16514|emb|CAA49172.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
  • gi|15215648|gb|AAK91369.1| MFE16.15/MFE16.15 [Arabidopsis thaliana] [NCBI NR]
  • gi|1495249|emb|CAA66118.1| eRF1-3 [Arabidopsis thaliana] [NCBI NR]
  • gi|1402882|emb|CAA66813.1| eukaryotic early release factor subunit 1-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|11994297|dbj|BAB01727.1| translation release factor subunit 1 [Arabidopsis thaliana] [NCBI NR]
  • (P35614) Eukaryotic peptide chain release factor subunit 1-3 (eRF1-3) (Eukaryotic release factor 1-3) (Omnipotent suppressor protein 1 homolog 3) (SUP1 homolog 3) [Swiss-Prot]
  • Eukaryotic peptide chain release factor subunit 1-3 OS=Arabidopsis thaliana GN=ERF1-3 PE=1 SV=1 [Swiss-Prot]
  • eukaryotic early release factor subunit 1-like protein [Arabidopsis thaliana]gi|21435997|gb|AAM51576.1| At3g26618/MFE16.15 [Arabidopsis thaliana]gi|1495249|emb|CAA66118.1| eRF1-3 [Arabidopsis thaliana]gi|16514|emb|CAA49172.1| unnamed protein product [A [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Eukaryotic peptide chain release factor subunit 1-3 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ERF1-3 | ERF1-3 (EUKARYOTIC RELEASE FACTOR 1-3); translation release factor | chr3:9790091-9791398 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • translation release factor subunit 1 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • eRF1-3 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unnamed protein product [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ERF1-3 (EUKARYOTIC RELEASE FACTOR 1-3); translation release factor/ translation release factor, codon specific [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • MFE16.15/MFE16.15 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At3g26618/MFE16.15 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • eukaryotic early release factor subunit 1-like protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Eukaryotic peptide chain release factor subunit 1-3 (eRF1-3) (Eukaryotic release factor 1-3) (Omnipotent suppressor protein 1 homolog 3) (SUP1 homolog 3) [nr-271106-contam.fasta]
  • | Symbols: ERF1-3 | eukaryotic release factor 1-3 | chr3:9788854-9790161 FORWARD LENGTH=435 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Eukaryotic peptide chain release factor subunit 1-3 OS=Arabidopsis thaliana GN=ERF1-3 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 435 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IEA]
    Biological Process: translational termination [IGI][ISS]
    Molecular Function: translation release factor activity [IGI][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADQESDKNI EIWKIKKLIK GLETARGNGT SMISLIMPPR DQVARVTKML ADEYGTASNI  60
   61 KSRVNRQSVL SAITSAQQRL KLYNKVPPNG LVLYTGTIVT DDGKEKKVTI DFEPFKPINA 120
  121 SLYLCDNKFH TEPLNELLES DDKFGFIVMD GNGTLFGTLS GNTREVLHKF TVDLPKKHGR 180
  181 GGQSALRFAR LRMEKRHNYV RKTAELATQF YINPATSQPN VSGLILAGSA DFKTELSQSE 240
  241 LFDPRLQAKI LNVVDVSYGG ENGFNQAIEL SAEILSNVKF IQEKKLIGKY FEEISQDTGK 300
  301 YVFGVEDTLK ALEMGAVETL IVWENLDINR YELKNNTTGE IVIKHLGKDQ ENNQSNFHDA 360
  361 ETNAELEVQE KMPLLEWFAN EYKRFGCTLE FVTNKSQEGS QFCRGFGGIG GLLRYQLDMR 420
  421 TFDELSDGEV YEDSD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..435] PSI-BLAST 167.0 Middle domain of eukaryotic peptide chain release factor subunit 1, ERF1; C-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1; N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • translation release factor activity
    		•  11.5102558694213 bayes_pls_golite062009
  • translation termination factor activity
    		•  11.4768548464911 bayes_pls_golite062009
  • translation release factor activity, codon specific
    		•  7.66455753522311 bayes_pls_golite062009
  • structural constituent of ribosome
    		•  2.97154934968642 bayes_pls_golite062009
  • nucleic acid binding
    		•  2.70960972397471 bayes_pls_golite062009
  • structural molecule activity
    		•  2.64319832043379 bayes_pls_golite062009
  • binding
    		•  2.24516466558786 bayes_pls_golite062009
  • translation regulator activity
    		•  1.83257472130927 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
    		•  1.81472167858216 bayes_pls_golite062009
  • RNA binding
    		•  1.59103459949328 bayes_pls_golite062009
  • mRNA binding
    		•  0.607146672130391 bayes_pls_golite062009
  • protein binding
    		•  0.381324299701367 bayes_pls_golite062009
  • catalytic activity
    		•  0.264002643439785 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle