| Protein: | ERF1Z_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 435 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ERF1Z_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
584.0 | [0..1] | [435..1] |
|
Region A: Residues: [1-435] |
1 11 21 31 41 51
| | | | | |
1 MADQESDKNI EIWKIKKLIK GLETARGNGT SMISLIMPPR DQVARVTKML ADEYGTASNI 60
61 KSRVNRQSVL SAITSAQQRL KLYNKVPPNG LVLYTGTIVT DDGKEKKVTI DFEPFKPINA 120
121 SLYLCDNKFH TEPLNELLES DDKFGFIVMD GNGTLFGTLS GNTREVLHKF TVDLPKKHGR 180
181 GGQSALRFAR LRMEKRHNYV RKTAELATQF YINPATSQPN VSGLILAGSA DFKTELSQSE 240
241 LFDPRLQAKI LNVVDVSYGG ENGFNQAIEL SAEILSNVKF IQEKKLIGKY FEEISQDTGK 300
301 YVFGVEDTLK ALEMGAVETL IVWENLDINR YELKNNTTGE IVIKHLGKDQ ENNQSNFHDA 360
361 ETNAELEVQE KMPLLEWFAN EYKRFGCTLE FVTNKSQEGS QFCRGFGGIG GLLRYQLDMR 420
421 TFDELSDGEV YEDSD
|
| Detection Method: |  |
| Confidence: | 167.0 |
| Match: | 1dt9A |
| Description: | Middle domain of eukaryotic peptide chain release factor subunit 1, ERF1; C-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1; N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| translation release factor activity | 11.5102558694213 | bayes_pls_golite062009 |
| translation termination factor activity | 11.4768548464911 | bayes_pls_golite062009 |
| translation release factor activity, codon specific | 7.66455753522311 | bayes_pls_golite062009 |
| structural constituent of ribosome | 2.97154934968642 | bayes_pls_golite062009 |
| nucleic acid binding | 2.70960972397471 | bayes_pls_golite062009 |
| structural molecule activity | 2.64319832043379 | bayes_pls_golite062009 |
| binding | 2.24516466558786 | bayes_pls_golite062009 |
| translation regulator activity | 1.83257472130927 | bayes_pls_golite062009 |
| translation factor activity, nucleic acid binding | 1.81472167858216 | bayes_pls_golite062009 |
| RNA binding | 1.59103459949328 | bayes_pls_golite062009 |
| mRNA binding | 0.607146672130391 | bayes_pls_golite062009 |
| protein binding | 0.381324299701367 | bayes_pls_golite062009 |
| catalytic activity | 0.264002643439785 | bayes_pls_golite062009 |
