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Protein Overview: DCUP2_ARATH

General Information:
Name(s) found: DCUP2_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|6014937|sp|O22886.1|DCUP2_ARATH RecName: Full=Uroporphyrinogen decarboxylase 2, chloroplastic; Short=URO-D2; Short=UPD2; Flags: Precursor [NCBI NR]
  • gi|2651307|gb|AAB87587.1| putative uroporphyrinogen decarboxylase [Arabidopsis thaliana] [NCBI NR]
  • gi|25291014|pir||B84830 probable uroporphyrinogen decarboxylase [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|23297097|gb|AAN13092.1| putative uroporphyrinogen decarboxylase [Arabidopsis thaliana] [NCBI NR]
  • gi|15226690|ref|NP_181581.1| HEME2; uroporphyrinogen decarboxylase [Arabidopsis thaliana] [NCBI NR]
  • Uroporphyrinogen decarboxylase, chloroplastic OS=Arabidopsis thaliana GN=At2g40490 PE=1 SV=1 [Swiss-Prot]
  • Uroporphyrinogen decarboxylase 2, chloroplastic OS=Arabidopsis thaliana GN=HEME2 PE=2 SV=1 [Swiss-Prot]
  • (O22886) Uroporphyrinogen decarboxylase, chloroplast precursor (EC 4.1.1.37) (URO-D) (UPD) [athaliana3702.FASTAC.txt]
  • putative uroporphyrinogen decarboxylase [Arabidopsis thaliana]gi|2651307|gb|AAB87587.1| putative uroporphyrinogen decarboxylase [Arabidopsis thaliana]gi|15226690|ref|NP_181581.1| uroporphyrinogen decarboxylase, putative / UPD, putative [Arabidopsis thal [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Uroporphyrinogen decarboxylase, chloroplast precursor [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: HEME2 | HEME2; uroporphyrinogen decarboxylase | chr2:16920039-16922066 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative uroporphyrinogen decarboxylase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • uroporphyrinogen decarboxylase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Uroporphyrinogen decarboxylase, chloroplast precursor (URO-D) (UPD) [nr-271106-contam.fasta]
  • | Symbols: HEME2 | Uroporphyrinogen decarboxylase | chr2:16912961-16914988 FORWARD LENGTH=394 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Uroporphyrinogen decarboxylase 2, chloroplastic OS=Arabidopsis thaliana GN=At2g40490 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 394 amino acids

    Gene Ontology:
    Cellular Component: chloroplast stroma [IDA]
    chloroplast [IDA]
    chloroplast envelope [IDA]
    Biological Process: porphyrin biosynthetic process [IEA]
    Molecular Function: uroporphyrinogen decarboxylase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSILQVSTSS LSSSTLLSIS PRKSLSSTKS CRIVRCSVEG TTVTERKVSA TSEPLLLRAV  60
   61 KGEVVDRPPV WLMRQAGRYM KSYQTLCEKY PSFRDRSENA DLVVEISLQP WKVFKPDGVI 120
  121 LFSDILTPLS GMNIPFDIVK GKGPIIFNPP QSAADVAQVR EFVPEESVPY VGEALRRLRN 180
  181 EVNNEAAVLG FVGAPFTLSS YVIEGGSSKN FTQIKRLAFS QPKVLHALLQ KFTTSMITYI 240
  241 RYQADSGAQA VQIFDSWATE LSPVDFEEFS LPYLKQIVEA VKQTHPNLPL ILYASGSGGL 300
  301 LERLARTGVD VVSLDWTVDM AEGRDRLGRD IAVQGNVDPG VLFGSKEFIT SRIHDTVKKA 360
  361 GRDKHILNLG HGIKVGTPEE NVAHFFEVAQ EIRY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..394] PSI-BLAST 112.0 Uroporphyrinogen decarboxylase, UROD

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • uroporphyrinogen decarboxylase activity
    		•  4.48282084722609 bayes_pls_golite062009
  • catalytic activity
    		•  2.37862248560593 bayes_pls_golite062009
  • carboxy-lyase activity
    		•  1.67493268854029 bayes_pls_golite062009
  • carbon-carbon lyase activity
    		•  1.54242506764415 bayes_pls_golite062009
  • binding
    		•  1.19577203030346 bayes_pls_golite062009
  • transferase activity
    		•  1.11861612545715 bayes_pls_golite062009
  • protein binding
    		•  0.30230496242508 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle