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Protein Overview: CNGC8_ARATH

General Information:
Name(s) found: CNGC8_ARATH [Swiss-Prot]
Description(s) found:
Found 8 descriptions.
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  • Putative cyclic nucleotide-gated ion channel 8 OS=Arabidopsis thaliana GN=CNGC8 PE=3 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 753 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEA]
    Biological Process: ion transport [IEA]
    Molecular Function: ion channel activity [ISS]
    calmodulin binding [ISS]
    cyclic nucleotide binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYKSQYISGH REKFVRLDDT DSRVSMSSNA TGMKKRSCFG LFNVTSRGGG KTKNTSKSFR  60
   61 EGVKIGSEGL KTIGKSFTSG VTRAVFPEDL RVSEKKIFDP QDKTLLLWNR MFVISCILAV 120
  121 SVDPLFFYLP IVDNSKNCIG IDSKLAVTTT TLRTIIDVFY LTRMALQFRT AYIAPSSRVF 180
  181 GRGELVIDPA KIAERYLTRY FIVDFLAVLP LPQIAVWKFL HGSKGTDVLP TKQALLHIVI 240
  241 TQYIPRFVRF IPLTSELKKT AGAFAEGAWA GAAYYLLWYM LASHITGAFW YMLSVERNDT 300
  301 CLRSACKVQP DPKVCVQILY CGSKLMSSRE TDWIKSVPDL FKNNCSAKSD ESKFNYGIYS 360
  361 QAVSSGIVSS TTFFSKFCYC LWWGLQNLST LGQGLQTSTY PGEVLFSIAI AVAGLLLFAL 420
  421 LIGNMQTYLQ SLTVRLEEMR IKRRDSEQWM HHRSLPQNLR ERVRRYDQYK WLETRGVDEE 480
  481 NIVQSLPKDL RRDIKRHLCL NLVRRVPLFA NMDERLLDAI CERLKPSLYT ESTYIVREGD 540
  541 PVNEMLFIIR GRLESVTTDG GRSGFFNRGL LKEGDFCGEE LLTWALDPKA GSNLPSSTRT 600
  601 VKALTEVEAF ALEAEELKFV ASQFRRLHSR QVQQTFRFYS QQWRTWAACF IQAAWRRHLR 660
  661 RKIAELRRKE EEEEEMDYED DEYYDDNMGG MVTRSDSSVG SSSTLRSTVF ASRFAANALK 720
  721 GHKLRVTESS KSLMNLTKPS EPDFEALDTD DLN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..91] deduced N/A No confident structure predictions are available.
    2 View Details [92..222] MSA 3.557991 View MSA. No confident structure predictions are available.
    3 View Details [223..490] PSI-BLAST 5.30103 No description for 2r9rB was found.
    4 View Details [491..653] PSI-BLAST 19.69897 Solution structure of the cNMP-binding domain from Arabidopsis thaliana cyclic nucleotide-regulated ion channel
    5 View Details [654..753] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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