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Protein Overview: COBL6_ARATH

General Information:
Name(s) found: COBL6_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|34222500|sp|O04500.2|COBL6_ARATH RecName: Full=COBRA-like protein 6; Flags: Precursor [NCBI NR]
  • gi|30681356|ref|NP_172450.2| COBL6 (COBRA-LIKE PROTEIN 6 PRECURSOR) [Arabidopsis thaliana] [NCBI NR]
  • COBRA-like protein 6 OS=Arabidopsis thaliana GN=COBL6 PE=2 SV=2 [Swiss-Prot]
  • (O04500) COBRA-like protein 6 precursor [Swiss-Prot]
  • COBRA-like protein 6 precursorgi|30681356|ref|NP_172450.2| phytochelatin synthetase-related [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 COBRA-like protein 6 precursor [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: COBL6 | COBL6 (COBRA-LIKE PROTEIN 6 PRECURSOR) | chr1:3168570-3170821 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • COBRA-like protein 6 precursor [nr-271106-contam.fasta]
  • | Symbols: COBL6 | COBRA-like protein 6 precursor | chr1:3168568-3170819 REVERSE LENGTH=454 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 454 amino acids

    Gene Ontology:
    Cellular Component: anchored to membrane [TAS]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGAMLNLLLV VTVILCSILS PTRFMIMIDK MVADGYDPLD PFGKIIIKWD LLLSSPGQHH  60
   61 VQVTLENMQE YRHVEKPGWK LSWHWLNQEV IWDMKGAETT EQGNCSAFAS SGNLPHCCLE 120
  121 RPTIVDLLPG ASLNVQVANC CRGGVLTSMS QDHANHVSAF HMTVGSSPDG PEEFNMPSNF 180
  181 DIGVPGYSCD NATSVSPTKF STDKGRRKTQ ALATWEAVCV YSQFRSSPSP KCCVSLSAFY 240
  241 YQNIVPCPTC SCGCSSSHCV KDGELPPYLE QKHDPDEEVS PVVKCSDHMC PIRIHWHVKV 300
  301 NYREYWRVKI TATNFNTMKN YTNWNLVVLH PNLKSVQQVF SFNYKSLTPY QNSINDTGMF 360
  361 WGVQFYNDVL LQEGKIGNVQ TELLLKKDMG NFTFREGWAF PRRILFNGDE CVMPSPDDFP 420
  421 RLPKSAHSSS SSSAVISSVS VVFCFLLHHL LLLV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..226] Pfam 61.236572 No description for PF04833.6 was found. No confident structure predictions are available.
    2 View Details [227..318] deduced N/A No confident structure predictions are available.
    3 View Details [319..454] MSA 2.023948 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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