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Protein Overview: CAPZB_ARATH

General Information:
Name(s) found: CAPZB_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|7239506|gb|AAF43232.1|AC012654_16 Similar to the F-actin capping protein beta subunit from Dictyostelium discoideum gi|115598. [Arabidopsis thaliana] [NCBI NR]
  • gi|34222650|sp|Q9M9G7.1|CAPZB_ARATH RecName: Full=Probable F-actin-capping protein subunit beta; AltName: Full=CapZ-beta [NCBI NR]
  • gi|30698814|ref|NP_177324.2| F-actin capping protein beta subunit family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|25295733|pir||D96740 hypothetical protein F14O23.17 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|117958773|gb|ABK59688.1| At1g71790 [Arabidopsis thaliana] [NCBI NR]
  • Probable F-actin-capping protein subunit beta OS=Arabidopsis thaliana GN=At1g71790 PE=1 SV=1 [Swiss-Prot]
  • (Q9M9G7) Probable F-actin capping protein beta subunit (CapZ-beta) [Swiss-Prot]
  • Similar to the F-actin capping protein beta subunit from Dictyostelium discoideum gi|115598. [Arabidopsis thaliana]gi|34222650|sp|Q9M9G7|CAPB_ARATH Probable F-actin capping protein beta subunit (CapZ-beta)gi|30698814|ref|NP_177324.2| F-actin capping pro [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Probable F-actin capping protein beta subunit [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | F-actin capping protein beta subunit family protein | chr1:27000531-27002447 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • Probable F-actin capping protein subunit beta (CapZ-beta) [nr-271106-contam.fasta]
  • At1g71790 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Similar to the F-actin capping protein beta subunit from Dictyostelium discoideum gi|115598. [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • actin binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Subunits of heterodimeric actin filament capping protein Capz superfamily | chr1:26996869-26998785 FORWARD LENGTH=256 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Probable F-actin-capping protein subunit beta OS=Arabidopsis thaliana GN=At1g71790 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 256 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IEA]
    F-actin capping protein complex [IEA][ISS]
    Biological Process: actin cytoskeleton organization [IEA][ISS]
    Molecular Function: actin binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAALGLLRR MPPKQSETAL SALLSLIPQH SSDLLSQVDL PLQVLRDIES GKDFILCEYN  60
   61 RDADSYRSPW SNKYLPPLED ALYPSSELRK LEVEANDIFA IYRDQYYEGG ISSVYMWEDD 120
  121 NEGFVACFLI KKDGSKSGHG RRGCLEEGAW DAIHVIQVGS EEEEMAQYCL TSTIMLSLTT 180
  181 DDESSGKFGL SGSIRRQMKM ELAVADGHLC NMGRMIEELE GKLRNSLDQV YFGKTREMVC 240
  241 TLRPPAEIVQ MRLPDT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..256] PSI-BLAST 117.0 Capz beta-1 subunit

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • actin binding
    		•  6.56144513012007 bayes_pls_golite062009
  • actin filament binding
    		•  5.39928513902709 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  5.10504476256679 bayes_pls_golite062009
  • binding
    		•  2.46279312857752 bayes_pls_golite062009
  • protein binding
    		•  1.31870344025745 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle