YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CAPZB_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAALGLLRR MPPKQSETAL SALLSLIPQH SSDLLSQVDL PLQVLRDIES GKDFILCEYN  60
   61 RDADSYRSPW SNKYLPPLED ALYPSSELRK LEVEANDIFA IYRDQYYEGG ISSVYMWEDD 120
  121 NEGFVACFLI KKDGSKSGHG RRGCLEEGAW DAIHVIQVGS EEEEMAQYCL TSTIMLSLTT 180
  181 DDESSGKFGL SGSIRRQMKM ELAVADGHLC NMGRMIEELE GKLRNSLDQV YFGKTREMVC 240
  241 TLRPPAEIVQ MRLPDT

Type	Start	End	Confidence
Signal Peptide	1	32	0.88
N-region	1	23
H-region	24	29
C-region	30	32
Cleavage Site	32	33
Non-Cytoplasmic	33	256	0.99