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Protein Overview: CD48A_ARATH

General Information:
Name(s) found: CD48A_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|6681343|gb|AAF23260.1|AC015985_18 putative transitional endoplasmic reticulum ATPase [Arabidopsis thaliana] [NCBI NR]
  • gi|222424942|dbj|BAH20422.1| AT3G09840 [Arabidopsis thaliana] [NCBI NR]
  • pir||S60112 transitional endoplasmic reticulum ATPase - Arabidopsis thaliana [NCBI NR]
  • gi|20453130|gb|AAM19807.1| AT3g09840/F8A24_11 [Arabidopsis thaliana] [NCBI NR]
  • gi|17473551|gb|AAL38252.1| putative transitional endoplasmic reticulum ATPase [Arabidopsis thaliana] [NCBI NR]
  • gi|1705677|sp|P54609.1|CD48A_ARATH RecName: Full=Cell division control protein 48 homolog A; Short=AtCDC48a [NCBI NR]
  • gi|15232776|ref|NP_187595.1| CDC48 (CELL DIVISION CYCLE 48); ATPase/ identical protein binding [Arabidopsis thaliana] [NCBI NR]
  • gi|1019904|gb|AAC49120.1| cell division cycle protein [NCBI NR]
  • Cell division control protein 48 homolog A OS=Arabidopsis thaliana GN=CDC48A PE=1 SV=1 [Swiss-Prot]
  • (P54609) Cell division control protein 48 homolog A (AtCDC48a) [Swiss-Prot]
  • putative transitional endoplasmic reticulum ATPase [Arabidopsis thaliana]gi|20453130|gb|AAM19807.1| AT3g09840/F8A24_11 [Arabidopsis thaliana]gi|17473551|gb|AAL38252.1| putative transitional endoplasmic reticulum ATPase [Arabidopsis thaliana]gi|1705677| [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Cell division control protein 48 homolog A [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ATCDC48, CDC48A, CDC48 | CDC48 (CELL DIVISION CYCLE 48); ATPase | chr3:3019499-3022837 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative transitional endoplasmic reticulum ATPase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • cell division cycle protein [nr-271106-contam.fasta]
  • CDC48 (CELL DIVISION CYCLE 48); ATP binding / ATPase/ hydrolase/ nucleoside-triphosphatase/ nucleotide binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Cell division control protein 48 homolog A (AtCDC48a) [nr-271106-contam.fasta]
  • AT3g09840/F8A24_11 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: CDC48, ATCDC48, CDC48A | cell division cycle 48 | chr3:3019494-3022832 FORWARD LENGTH=809 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 809 amino acids

    Gene Ontology:
    Cellular Component: nuclear envelope [IDA]
    nucleus [IDA]
    cytosolic ribosome [IDA]
    cytoplasm [IDA]
    cell wall [IDA]
    spindle [IDA]
    nucleolus [IDA]
    plasma membrane [IDA]
    phragmoplast [IDA]
    Biological Process: cell division [IMP]
    pollen tube growth [IMP]
    response to cadmium ion [IEP]
    pollen germination [IMP]
    Molecular Function: ATPase activity [ISS]
    identical protein binding [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTPAESSDS KSKKDFSTAI LERKKSPNRL VVDEAINDDN SVVSLHPATM EKLQLFRGDT  60
   61 ILIKGKKRKD TVCIALADET CEEPKIRMNK VVRSNLRVRL GDVISVHQCP DVKYGKRVHI 120
  121 LPVDDTVEGV TGNLFDAYLK PYFLEAYRPV RKGDLFLVRG GMRSVEFKVI ETDPAEYCVV 180
  181 APDTEIFCEG EPVKREDEER LDDVGYDDVG GVRKQMAQIR ELVELPLRHP QLFKSIGVKP 240
  241 PKGILLYGPP GSGKTLIARA VANETGAFFF CINGPEIMSK LAGESESNLR KAFEEAEKNA 300
  301 PSIIFIDEID SIAPKREKTN GEVERRIVSQ LLTLMDGLKS RAHVIVMGAT NRPNSIDPAL 360
  361 RRFGRFDREI DIGVPDEIGR LEVLRIHTKN MKLAEDVDLE RISKDTHGYV GADLAALCTE 420
  421 AALQCIREKM DVIDLEDDSI DAEILNSMAV TNEHFHTALG NSNPSALRET VVEVPNVSWN 480
  481 DIGGLENVKR ELQETVQYPV EHPEKFEKFG MSPSKGVLFY GPPGCGKTLL AKAIANECQA 540
  541 NFISVKGPEL LTMWFGESEA NVREIFDKAR QSAPCVLFFD ELDSIATQRG GGSGGDGGGA 600
  601 ADRVLNQLLT EMDGMNAKKT VFIIGATNRP DIIDSALLRP GRLDQLIYIP LPDEDSRLNI 660
  661 FKAALRKSPI AKDVDIGALA KYTQGFSGAD ITEICQRACK YAIRENIEKD IEKEKRRSEN 720
  721 PEAMEEDGVD EVSEIKAAHF EESMKYARRS VSDADIRKYQ AFAQTLQQSR GFGSEFRFEN 780
  781 SAGSGATTGV ADPFATSAAA AGDDDDLYN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..809] PSI-BLAST 1000.0 VCP/p97


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle