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Protein Overview: BAS1A_ARATH

General Information:
Name(s) found: BAS1A_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|6041816|gb|AAF02131.1|AC009918_3 putative 2-cys peroxiredoxin [Arabidopsis thaliana] [NCBI NR]
  • gi|19310515|gb|AAL84991.1| AT3g11630/T19F11_3 [Arabidopsis thaliana] [NCBI NR]
  • gi|16930449|gb|AAL31910.1|AF419578_1 AT3g11630/T19F11_3 [Arabidopsis thaliana] [NCBI NR]
  • gi|15229806|ref|NP_187769.1| 2-cys peroxiredoxin, chloroplast (BAS1) [Arabidopsis thaliana] [NCBI NR]
  • gi|14916972|sp|Q96291.2|BAS1A_ARATH RecName: Full=2-Cys peroxiredoxin BAS1, chloroplastic; Short=2-Cys peroxiredoxin A; Short=2-Cys Prx A; AltName: Full=Thiol-specific antioxidant protein A; Flags: Precursor [NCBI NR]
  • gi|12322892|gb|AAG51430.1|AC008153_3 putative 2-cys peroxiredoxin BAS1 precursor (thiol-specific antioxidant protein); 114724-116472 [Arabidopsis thaliana] [NCBI NR]
  • gi|11762140|gb|AAG40348.1|AF324996_1 AT3g11630 [Arabidopsis thaliana] [NCBI NR]
  • 2-cys peroxiredoxin BAS1, chloroplast precursor (EC 1.11.1.15) - Arabidopsis thaliana (Mouse-ear cress) [Swiss-Prot]
  • 2-Cys peroxiredoxin BAS1, chloroplastic OS=Arabidopsis thaliana GN=BAS1 PE=1 SV=2 [Swiss-Prot]
  • (Q96291) 2-cys peroxiredoxin BAS1, chloroplast precursor [athaliana3702.FASTAC.txt]
  • putative 2-cys peroxiredoxin [Arabidopsis thaliana]gi|19310515|gb|AAL84991.1| AT3g11630/T19F11_3 [Arabidopsis thaliana]gi|16930449|gb|AAL31910.1| AT3g11630/T19F11_3 [Arabidopsis thaliana]gi|11762140|gb|AAG40348.1| AT3g11630 [Arabidopsis thaliana]gi|12 [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 2-cys peroxiredoxin BAS1, chloroplast precursor [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | 2-cys peroxiredoxin, chloroplast (BAS1) | chr3:3672195-3673943 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • AT3g11630/T19F11_3 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • 2-cys peroxiredoxin BAS1, chloroplast precursor [nr-271106-contam.fasta]
  • putative 2-cys peroxiredoxin BAS1 precursor (thiol-specific antioxidant protein); 114724-116472 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • AT3g11630 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • antioxidant [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative 2-cys peroxiredoxin [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Thioredoxin superfamily protein | chr3:3672189-3673937 FORWARD LENGTH=266 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 266 amino acids

    Gene Ontology:
    Cellular Component: chloroplast stroma [IDA]
    chloroplast [IDA]
    stromule [IDA]
    apoplast [IDA]
    chloroplast envelope [IDA]
    thylakoid [IDA]
    Biological Process: response to cold [IEP]
    defense response to bacterium [IEP]
    Molecular Function: antioxidant activity [ISS]
    peroxiredoxin activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASVASSTTL ISSPSSRVFP AKSSLSSPSV SFLRTLSSPS ASASLRSGFA RRSSLSSTSR  60
   61 RSFAVKAQAD DLPLVGNKAP DFEAEAVFDQ EFIKVKLSDY IGKKYVILFF YPLDFTFVCP 120
  121 TEITAFSDRH SEFEKLNTEV LGVSVDSVFS HLAWVQTDRK SGGLGDLNYP LISDVTKSIS 180
  181 KSFGVLIHDQ GIALRGLFII DKEGVIQHST INNLGIGRSV DETMRTLQAL QYIQENPDEV 240
  241 CPAGWKPGEK SMKPDPKLSK EYFSAI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..266] PSI-BLAST 66.39794 Thioredoxin peroxidase 2 (thioredoxin peroxidase B, 2-cys peroxiredoxin)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • alkyl hydroperoxide reductase activity
    		•  4.29610283853788 bayes_pls_golite062009
  • antioxidant activity
    		•  3.8464796631544 bayes_pls_golite062009
  • peroxidase activity
    		•  3.43831566988273 bayes_pls_golite062009
  • oxidoreductase activity, acting on peroxide as acceptor
    		•  3.43831566988273 bayes_pls_golite062009
  • selenium binding
    		•  2.92496040718744 bayes_pls_golite062009
  • glutathione peroxidase activity
    		•  2.56524997297011 bayes_pls_golite062009
  • transcription regulator activity
    		•  2.30799114442278 bayes_pls_golite062009
  • oxidoreductase activity, acting on sulfur group of donors
    		•  2.23310780102446 bayes_pls_golite062009
  • peroxiredoxin activity
    		•  2.12777217096121 bayes_pls_golite062009
  • thioredoxin peroxidase activity
    		•  1.96134566495756 bayes_pls_golite062009
  • protein disulfide oxidoreductase activity
    		•  1.47769936616412 bayes_pls_golite062009
  • disulfide oxidoreductase activity
    		•  1.32811008894503 bayes_pls_golite062009
  • transferase activity
    		•  1.26687471229876 bayes_pls_golite062009
  • binding
    		•  1.25802922431343 bayes_pls_golite062009
  • protein binding
    		•  1.18479617596618 bayes_pls_golite062009
  • molecular transducer activity
    		•  1.11518182894524 bayes_pls_golite062009
  • signal transducer activity
    		•  1.11518182894524 bayes_pls_golite062009
  • catalytic activity
    		•  0.672192331361968 bayes_pls_golite062009
  • peptide binding
    		•  0.374493676068876 bayes_pls_golite062009
    		• 0.359224524631956 bayes_pls_golite062009
  • NADH dehydrogenase activity
    		•  0.23291471505999 bayes_pls_golite062009
  • copper ion binding
    		•  0.178842772364502 bayes_pls_golite062009
  • NADH dehydrogenase (ubiquinone) activity
    		•  0.16328723676608 bayes_pls_golite062009
  • NADH dehydrogenase (quinone) activity
    		•  0.0434052164026002 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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