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Protein Overview: ATP4_ARATH

General Information:
Name(s) found: ATP4_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|9759445|dbj|BAB10242.1| ATP synthase delta' chain, mitochondrial precursor [Arabidopsis thaliana] [NCBI NR]
  • gi|2493045|sp|Q96252.1|ATP4_ARATH RecName: Full=ATP synthase subunit delta', mitochondrial; AltName: Full=F-ATPase delta' subunit; Flags: Precursor [NCBI NR]
  • gi|1655484|dbj|BAA13601.1| delta-prime subunit of mitochondrial F1-ATPase [Arabidopsis thaliana] [NCBI NR]
  • gi|15810621|gb|AAL07198.1| putative ATP synthase delta chain, mitochondrial precursor [Arabidopsis thaliana] [NCBI NR]
  • gi|15237998|ref|NP_199514.1| ATP synthase delta' chain, mitochondrial [Arabidopsis thaliana] [NCBI NR]
  • gi|13430526|gb|AAK25885.1|AF360175_1 putative ATP synthase delta chain, mitochondrial precursor [Arabidopsis thaliana] [NCBI NR]
  • ATP synthase subunit delta', mitochondrial OS=Arabidopsis thaliana GN=At5g47030 PE=1 SV=1 [Swiss-Prot]
  • (Q96252) ATP synthase delta' chain, mitochondrial precursor (EC 3.6.3.14) [athaliana3702.FASTAC.txt]
  • putative ATP synthase delta chain, mitochondrial precursor [Arabidopsis thaliana]gi|13430526|gb|AAK25885.1| putative ATP synthase delta chain, mitochondrial precursor [Arabidopsis thaliana]gi|9759445|dbj|BAB10242.1| ATP synthase delta' chain, mitochondr [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 ATP synthase delta' chain, mitochondrial precursor [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | ATP synthase delta' chain, mitochondrial | chr5:19107611-19109261 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • hydrogen-transporting ATP synthase, rotational mechanism [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative ATP synthase delta chain, mitochondrial precursor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ATP synthase delta' chain, mitochondrial precursor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ATP synthase delta' chain, mitochondrial precursor [nr-271106-contam.fasta]
  • delta-prime subunit of mitochondrial F1-ATPase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | ATPase, F1 complex, delta/epsilon subunit | chr5:19090384-19092034 FORWARD LENGTH=203 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 203 amino acids

    Gene Ontology:
    Cellular Component: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) [IDA]
    mitochondrion [IDA]
    mitochondrial proton-transporting ATP synthase complex [ISS]
    Biological Process: response to salt stress [IEP]
    Molecular Function: zinc ion binding [IDA]
    hydrogen ion transporting ATP synthase activity, rotational mechanism [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKQASRLLS RSVAAASSKS VTTRAFSTEL PSTLDSTFVE AWKKVAPNMD PPQTPSAFMK  60
   61 PRPSTPSSIP TKLTVNFVLP YTSELTGKEV DMVIIPASTG QMGVLPGHVP TIAELKPGIM 120
  121 SVHEGTDVKK YFLSSGFAFL HANSVADIIA VEAVPLDHID PSQVQKGLAE FQQKLASATT 180
  181 DLEKAEAQIG VEVHSAINAA LSG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..203] PSI-BLAST 35.30103 Epsilon subunit of F1F0-ATP synthase C-terminal domain; Epsilon subunit of F1F0-ATP synthase N-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transporter activity
    		•  0.60556531833502 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  0.43766033030643 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.42137115936368 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  0.41252013023381 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  0.4032014320641 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  0.398676918084901 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  0.390720223739359 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  0.3851037199971 bayes_pls_golite062009
  • hydrogen ion transmembrane transporter activity
    		•  0.384140437248139 bayes_pls_golite062009
  • hydrogen ion transporting ATP synthase activity, rotational mechanism
    		•  0.0775152004693602 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle