YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ATP4_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKQASRLLS RSVAAASSKS VTTRAFSTEL PSTLDSTFVE AWKKVAPNMD PPQTPSAFMK  60
   61 PRPSTPSSIP TKLTVNFVLP YTSELTGKEV DMVIIPASTG QMGVLPGHVP TIAELKPGIM 120
  121 SVHEGTDVKK YFLSSGFAFL HANSVADIIA VEAVPLDHID PSQVQKGLAE FQQKLASATT 180
  181 DLEKAEAQIG VEVHSAINAA LSG

Type	Start	End	Confidence
Signal Peptide	1	25	0.85
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	203	0.99