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Protein Overview: ATH1_ARATH

General Information:
Name(s) found: ATH1_ARATH [Swiss-Prot]
Description(s) found:
Found 19 descriptions.
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  • Homeobox protein ATH1 OS=Arabidopsis thaliana GN=ATH1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 473 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: regulation of gibberellin biosynthetic process [IMP]
    photomorphogenesis [IDA]
    negative regulation of cell proliferation [IMP]
    meristem maintenance [IGI]
    vegetative to reproductive phase transition of meristem [IMP]
    floral organ abscission [IMP]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS]
    sequence-specific DNA binding [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDNNNNNNTF SSLDNVMTNQ NPLLMDFIPS REDSTSFSTM LPWNTIRSDP LQMGGFDIFN  60
   61 SMLTNKYLSS SPRSIDVQDN RNVEFMAPPP HPPPLHPLDH LRHYDDSSNN MWGFEANSEF 120
  121 QAFSGVVGPS EPMMSTFGEE DFPFLISNKR NNELSLSLAS DVSDECSEIS LCAATRLASE 180
  181 QASCSSKDIS NNVVTQGFSQ LIFGSKYLHS VQEILSHFAA YSLDYSSRGT ESGAASSAFT 240
  241 SRFENITEFL DGDSNNSEAG FGSTFQRRAL EAKKTHLLDL LQMVDDRYSH CVDEIHTVIS 300
  301 AFHAATELDP QLHTRFALQT VSFLYKNLRE RICKKIISMG SVLERGKDKT QETSMFHQHC 360
  361 LLQQLKRKNH QIWRPQRGLP EKSVSVLRNW MFQNFLHPYP KDSEKHLLAI RSGLTRSQVS 420
  421 NWFINARVRL WKPMIEEMYA EMNKRKLNNS HIQPNGPTLR MPKSVMMSQA MHK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..190] deduced N/A No confident structure predictions are available.
    2 View Details [191..306] Pfam 15.09691 No description for PF07526.2 was found. No confident structure predictions are available.
    3 View Details [307..473] PSI-BLAST 12.522879 No description for 2d5vA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle