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Protein Overview: ARFB_ARATH

General Information:
Name(s) found: ARFB_ARATH [Swiss-Prot]
Description(s) found:
Found 23 descriptions.
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  • Auxin response factor 2 OS=Arabidopsis thaliana GN=ARF2 PE=1 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 859 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    chloroplast [IEA]
    Biological Process: negative regulation of transcription, DNA-dependent [TAS]
    leaf senescence [IMP]
    negative regulation of cell proliferation [IMP]
    floral organ abscission [IMP]
    ovule development [IMP]
    positive regulation of flower development [IMP]
    fruit dehiscence [IMP]
    Molecular Function: transcription factor activity [ISS]
    protein binding [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSEVSMKG NRGGDNFSSS GFSDPKETRN VSVAGEGQKS NSTRSAAAER ALDPEAALYR  60
   61 ELWHACAGPL VTVPRQDDRV FYFPQGHIEQ VEASTNQAAE QQMPLYDLPS KLLCRVINVD 120
  121 LKAEADTDEV YAQITLLPEA NQDENAIEKE APLPPPPRFQ VHSFCKTLTA SDTSTHGGFS 180
  181 VLRRHADECL PPLDMSRQPP TQELVAKDLH ANEWRFRHIF RGQPRRHLLQ SGWSVFVSSK 240
  241 RLVAGDAFIF LRGENGELRV GVRRAMRQQG NVPSSVISSH SMHLGVLATA WHAISTGTMF 300
  301 TVYYKPRTSP SEFIVPFDQY MESVKNNYSI GMRFKMRFEG EEAPEQRFTG TIVGIEESDP 360
  361 TRWPKSKWRS LKVRWDETSS IPRPDRVSPW KVEPALAPPA LSPVPMPRPK RPRSNIAPSS 420
  421 PDSSMLTREG TTKANMDPLP ASGLSRVLQG QEYSTLRTKH TESVECDAPE NSVVWQSSAD 480
  481 DDKVDVVSGS RRYGSENWMS SARHEPTYTD LLSGFGTNID PSHGQRIPFY DHSSSPSMPA 540
  541 KRILSDSEGK FDYLANQWQM IHSGLSLKLH ESPKVPAATD ASLQGRCNVK YSEYPVLNGL 600
  601 STENAGGNWP IRPRALNYYE EVVNAQAQAQ AREQVTKQPF TIQEETAKSR EGNCRLFGIP 660
  661 LTNNMNGTDS TMSQRNNLND AAGLTQIASP KVQDLSDQSK GSKSTNDHRE QGRPFQTNNP 720
  721 HPKDAQTKTN SSRSCTKVHK QGIALGRSVD LSKFQNYEEL VAELDRLFEF NGELMAPKKD 780
  781 WLIVYTDEEN DMMLVGDDPW QEFCCMVRKI FIYTKEEVRK MNPGTLSCRS EEEAVVGEGS 840
  841 DAKDAKSASN PSLSSAGNS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..153] deduced N/A No confident structure predictions are available.
    2 View Details [154..355] PSI-BLAST 38.69897 Solution Structure of the B3 DNA-Binding Domain of RAV1
    3 View Details [356..415] deduced N/A No confident structure predictions are available.
    4 View Details [416..660] MSA 7.303997 View MSA. No confident structure predictions are available.
    5 View Details [661..709] deduced N/A No confident structure predictions are available.
    6 View Details [710..859] FFAS03 1.06 Bud emergence mediator Bemp1


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.83

    Source: Reynolds et al. (2008)

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    Created and Maintained by: Michael Riffle