| Protein: | ARFB_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 859 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ARFB_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
977.0 | [0..1] | [859..1] |
|
Region A: Residues: [1-153] |
1 11 21 31 41 51
| | | | | |
1 MASSEVSMKG NRGGDNFSSS GFSDPKETRN VSVAGEGQKS NSTRSAAAER ALDPEAALYR 60
61 ELWHACAGPL VTVPRQDDRV FYFPQGHIEQ VEASTNQAAE QQMPLYDLPS KLLCRVINVD 120
121 LKAEADTDEV YAQITLLPEA NQDENAIEKE APL
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [154-355] |
1 11 21 31 41 51
| | | | | |
1 PPPPRFQVHS FCKTLTASDT STHGGFSVLR RHADECLPPL DMSRQPPTQE LVAKDLHANE 60
61 WRFRHIFRGQ PRRHLLQSGW SVFVSSKRLV AGDAFIFLRG ENGELRVGVR RAMRQQGNVP 120
121 SSVISSHSMH LGVLATAWHA ISTGTMFTVY YKPRTSPSEF IVPFDQYMES VKNNYSIGMR 180
181 FKMRFEGEEA PEQRFTGTIV GI
|
| Detection Method: | |
| Confidence: | 38.69897 |
| Match: | 1widA |
| Description: | Solution Structure of the B3 DNA-Binding Domain of RAV1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [356-415] |
1 11 21 31 41 51
| | | | | |
1 EESDPTRWPK SKWRSLKVRW DETSSIPRPD RVSPWKVEPA LAPPALSPVP MPRPKRPRSN 60
61
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [416-660] |
1 11 21 31 41 51
| | | | | |
1 IAPSSPDSSM LTREGTTKAN MDPLPASGLS RVLQGQEYST LRTKHTESVE CDAPENSVVW 60
61 QSSADDDKVD VVSGSRRYGS ENWMSSARHE PTYTDLLSGF GTNIDPSHGQ RIPFYDHSSS 120
121 PSMPAKRILS DSEGKFDYLA NQWQMIHSGL SLKLHESPKV PAATDASLQG RCNVKYSEYP 180
181 VLNGLSTENA GGNWPIRPRA LNYYEEVVNA QAQAQAREQV TKQPFTIQEE TAKSREGNCR 240
241 LFGIP
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [661-709] |
1 11 21 31 41 51
| | | | | |
1 LTNNMNGTDS TMSQRNNLND AAGLTQIASP KVQDLSDQSK GSKSTNDHR
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [710-859] |
1 11 21 31 41 51
| | | | | |
1 EQGRPFQTNN PHPKDAQTKT NSSRSCTKVH KQGIALGRSV DLSKFQNYEE LVAELDRLFE 60
61 FNGELMAPKK DWLIVYTDEE NDMMLVGDDP WQEFCCMVRK IFIYTKEEVR KMNPGTLSCR 120
121 SEEEAVVGEG SDAKDAKSAS NPSLSSAGNS
|
| Detection Method: | |
| Confidence: | 1.06 |
| Match: | 1ip9A |
| Description: | Bud emergence mediator Bemp1 |
Matching Structure (courtesy of the PDB): |
|
