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Protein Overview: PIN8_ARATH

General Information:
Name(s) found: PIN8_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|42558880|sp|Q9FFD0.2|PIN8_ARATH RecName: Full=Putative auxin efflux carrier component 8; Short=AtPIN8 [NCBI NR]
  • gi|240256298|ref|NP_197157.4| PIN5 (PIN-FORMED 5); auxin:hydrogen symporter/ transporter [Arabidopsis thaliana] [NCBI NR]
  • Putative auxin efflux carrier component 8 OS=Arabidopsis thaliana GN=PIN8 PE=3 SV=2 [Swiss-Prot]
  • (Q9FFD0) Putative auxin efflux carrier component 8 (AtPIN8) [Swiss-Prot]
  • Putative auxin efflux carrier component 8 (AtPIN8) [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Putative auxin efflux carrier component 8 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: PIN5 | Auxin efflux carrier family protein | chr5:5400735-5402626 FORWARD LENGTH=351 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 351 amino acids

    Gene Ontology:
    Cellular Component: endoplasmic reticulum [IDA]
    Biological Process: auxin polar transport [ISS]
    auxin homeostasis [IMP]
    Molecular Function: auxin:hydrogen symporter activity [ISS]
    transporter activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MINCGDVYKV IEAMVPLYVA LILGYGSVKW WHIFTRDQCD AINRLVCYFT LPLFTIEFTA  60
   61 HVDPFNMNYR FIAADVLSKV IIVTVLALWA KYSNKGSYCW SITSFSLCTL TNSLVVGVPL 120
  121 AKAMYGQQAV DLVVQSSVFQ AIVWLTLLLF VLEFRKAGFS SNNISDVQVD NINIESGKRE 180
  181 TVVVGEKSFL EVMSLVWLKL ATNPNCYSCI LGIAWAFISN RWHLELPGIL EGSILIMSKA 240
  241 GTGTAMFNMG IFMALQEKLI VCGTSLTVMG MVLKFIAGPA AMAIGSIVLG LHGDVLRVAI 300
  301 IQAALPQSIT SFIFAKEYGL HADVLSTAVI FGMLVSLPVL VAYYAALEFI H

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..202] MSA 9.412994 View MSA. No confident structure predictions are available.
    2 View Details [203..351] MSA 65.471997 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle