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View Structure Prediction Details

Protein: PIN8_ARATH
Organism: Arabidopsis thaliana
Length: 351 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PIN8_ARATH.

Description E-value Query
Range
Subject
Range
gi|49035698, gi|... - gi|87162565|gb|ABD28360.1| Auxin Efflux Carrier [Medicago truncatula], gi|49035698|gb|AAT48629.1| pu...
165.0 [0..1] [351..1]
gi|76609521, gi|... - gi|76609529|ref|XP_879646.1| PREDICTED: similar to Protein GPR155 (G-protein coupled receptor PGR22)...
159.0 [0..6] [349..40]
gi|31873990, gi|... - ref|NP_689742.3| G protein-coupled receptor 155 [Homo sapiens], gi|31873990|emb|CAD97915.1| hypothe...
157.0 [0..6] [349..38]
gi|94368290, gi|... - gi|94368290|ref|XP_001002594.1| PREDICTED: similar to Protein GPR155 (G-protein coupled receptor PGR...
157.0 [0..6] [349..36]
GP155_PONPY - Integral membrane protein GPR155 - Pongo pygmaeus (Orangutan)
GP155_PONAB - Integral membrane protein GPR155 OS=Pongo abelii GN=GPR155 PE=2 SV=1
157.0 [0..6] [349..40]
gi|109100123 - gi|109100123|ref|XP_001089835.1| PREDICTED: G protein-coupled receptor 155 [Macaca mulatta]
156.0 [0..6] [349..40]

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Predicted Domain #1
Region A:
Residues: [1-202]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MINCGDVYKV IEAMVPLYVA LILGYGSVKW WHIFTRDQCD AINRLVCYFT LPLFTIEFTA  60
   61 HVDPFNMNYR FIAADVLSKV IIVTVLALWA KYSNKGSYCW SITSFSLCTL TNSLVVGVPL 120
  121 AKAMYGQQAV DLVVQSSVFQ AIVWLTLLLF VLEFRKAGFS SNNISDVQVD NINIESGKRE 180
  181 TVVVGEKSFL EVMSLVWLKL AT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [203-351]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NPNCYSCILG IAWAFISNRW HLELPGILEG SILIMSKAGT GTAMFNMGIF MALQEKLIVC  60
   61 GTSLTVMGMV LKFIAGPAAM AIGSIVLGLH GDVLRVAIIQ AALPQSITSF IFAKEYGLHA 120
  121 DVLSTAVIFG MLVSLPVLVA YYAALEFIH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle