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Protein Overview: PIN4_ARATH

General Information:
Name(s) found: PIN4_ARATH [Swiss-Prot]
Description(s) found:
Found 14 descriptions.
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  • Auxin efflux carrier component 4 OS=Arabidopsis thaliana GN=PIN4 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 616 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEA]
    endomembrane system [IEA]
    Biological Process: root development [IMP]
    auxin polar transport [IMP][ISS]
    pattern specification process [IGI]
    Molecular Function: auxin:hydrogen symporter activity [ISS]
    transporter activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MITWHDLYTV LTAVVPLYVA MILAYGSVQW WKIFSPDQCS GINRFVAIFA VPLLSFHFIS  60
   61 TNDPYAMNFR FVAADTLQKI IMLVLLALWA NLTKNGSLEW MITIFSLSTL PNTLVMGIPL 120
  121 LIAMYGTYAG SLMVQVVVLQ CIIWYTLLLF LFEYRGAKLL IMEQFPETGA SIVSFKVESD 180
  181 VVSLDGHDFL ETDAEIGNDG KLHVTVRKSN ASRRSLMMTP RPSNLTGAEI YSLSSTPRGS 240
  241 NFNHSDFYSV MGFPGGRLSN FGPADLYSVQ SSRGPTPRPS NFEENNAVKY GFYNNTNSSV 300
  301 PAAGSYPAPN PEFSTGTGVS TKPNKIPKEN QQQLQEKDSK ASHDAKELHM FVWSSSASPV 360
  361 SDVFGGGAGD NVATEQSEQG AKEIRMVVSD QPRKSNARGG GDDIGGLDSG EGEREIEKAT 420
  421 AGLNKMGSNS TAELEAAGGD GGGNNGTHMP PTSVMTRLIL IMVWRKLIRN PNTYSSLIGL 480
  481 IWALVAYRWH VAMPKILQQS ISILSDAGLG MAMFSLGLFM ALQPKIIACG NSVATFAMAV 540
  541 RFITGPAIMA VAGIAIGLHG DLLRIAIVQA ALPQGIVPFV FAKEYNVHPT ILSTGVIFGM 600
  601 LIALPITLVY YILLGL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..184] Pfam 17.823909 No description for PF03547.9 was found. No confident structure predictions are available.
    2 View Details [185..461] FFAS03 1.12 30S subunit
    3 View Details [462..616] Pfam 11.677781 No description for PF03547.9 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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