| Protein: | PIN4_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 616 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PIN4_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
628.0 | [0..1] | [616..1] |
|
Region A: Residues: [1-184] |
1 11 21 31 41 51
| | | | | |
1 MITWHDLYTV LTAVVPLYVA MILAYGSVQW WKIFSPDQCS GINRFVAIFA VPLLSFHFIS 60
61 TNDPYAMNFR FVAADTLQKI IMLVLLALWA NLTKNGSLEW MITIFSLSTL PNTLVMGIPL 120
121 LIAMYGTYAG SLMVQVVVLQ CIIWYTLLLF LFEYRGAKLL IMEQFPETGA SIVSFKVESD 180
181 VVSL
|
| Detection Method: |  |
| Confidence: | 17.823909 |
| Match: | PF03547.9 |
| Description: | No description for PF03547.9 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [185-461] |
1 11 21 31 41 51
| | | | | |
1 DGHDFLETDA EIGNDGKLHV TVRKSNASRR SLMMTPRPSN LTGAEIYSLS STPRGSNFNH 60
61 SDFYSVMGFP GGRLSNFGPA DLYSVQSSRG PTPRPSNFEE NNAVKYGFYN NTNSSVPAAG 120
121 SYPAPNPEFS TGTGVSTKPN KIPKENQQQL QEKDSKASHD AKELHMFVWS SSASPVSDVF 180
181 GGGAGDNVAT EQSEQGAKEI RMVVSDQPRK SNARGGGDDI GGLDSGEGER EIEKATAGLN 240
241 KMGSNSTAEL EAAGGDGGGN NGTHMPPTSV MTRLILI
|
| Detection Method: | |
| Confidence: | 1.12 |
| Match: | 1dv4A |
| Description: | 30S subunit |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [462-616] |
1 11 21 31 41 51
| | | | | |
1 MVWRKLIRNP NTYSSLIGLI WALVAYRWHV AMPKILQQSI SILSDAGLGM AMFSLGLFMA 60
61 LQPKIIACGN SVATFAMAVR FITGPAIMAV AGIAIGLHGD LLRIAIVQAA LPQGIVPFVF 120
121 AKEYNVHPTI LSTGVIFGML IALPITLVYY ILLGL
|
| Detection Method: | |
| Confidence: | 11.677781 |
| Match: | PF03547.9 |
| Description: | No description for PF03547.9 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
