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Protein Overview: xbx-7

General Information:
Name(s) found: xbx-7 / CE40712 [WormBase]
Description(s) found:
Found 10 descriptions.
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  • WBGene00020100 locus:mks-1 status:Partially_confirmed UniProt:O17269 protein_id:CCD67218.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 485 amino acids

    Gene Ontology:
    Cellular Component: microtubule basal body [IDA]
    Biological Process: larval foraging behavior [IGI]
    cilium morphogenesis [IGI]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRLSSTFGF AGSVDRLSIR VQLFQKGIQS LDFDRFNQDN NVIDERPSKS RLDDVTFKWK  60
   61 QKVGRAENSN RRIFTLRDGD EFPDYLSRFK PTEVSEPAEN KKESEYPHND YIVYRKSAAS 120
  121 RPTIKKSYLY IFARLGPMDI EDPSAVELIS RITVTDTNRL TVEPAINQAD DEGIVLETKF 180
  181 GDYTVKIQID DVENEKSTED QLTSIPESET FMAARDGLVE TVVHVKLIKG VNFLFDEGLT 240
  241 IDYKLQMPRG IKLKSENATG RSQRYSSAEQ DGGDINFGYF LEFVFESRNT DFCPLLMLRF 300
  301 MAVDYWGRQY IAGYGSGYVS LTPGKSLSKI HLWRPISHNS LYEMFVGQAI DIDYFGTPKS 360
  361 SLERVGRDGQ PSGIVIMKTD CVAQSRQFMA RDILYQLKYG SKMADMGLRS DFYQRIIKVL 420
  421 MEFEEARSKL IIARAINKKK IKIEYGQRLK VLPNGEIVLQ CTPVMGRKSR STCEKMYRVR 480
  481 CHSIH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..206] MSA 3.024972 View MSA. No confident structure predictions are available.
    2 View Details [207..383] MSA 27.056972 View MSA. No confident structure predictions are available.
    3 View Details [384..485] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.76

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle