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Protein Overview: CE36160

General Information:
Name(s) found: CE36160 [WormBase]
Description(s) found:
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  • WBGene00009695 status:Partially_confirmed UniProt:O02260 protein_id:CAB03101.3 [WormBase]
  • gi|71986127|ref|NP_493327.2| hypothetical protein F44F1.3 [Caenorhabditis elegans] [NCBI NR]
  • gi|38422282|emb|CAB03101.3| C. elegans protein F44F1.3, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • [wormpep115.fasta]
  • Hypothetical protein F44F1.3 [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • CE36160 WBGene00009695 calpain-like protease status:Partially_confirmed TR:O02260 protein_id:CAB03101.3 [wormpep150.fasta]
  • 36160 WBGene00009695 calpain-like protease status:Partially_confirmed TR:O02260 protein_id:CAB03101.3 [wormpep130-phg-ecoli-orf-rand.fasta]
  • calpain-like protease status:Partially_confirmed TN:CAB03101 protein_id:CAB03101.3 [wormpep115.fasta.reversed]
  • CE36160 WBGene00009695 calpain-like protease status:Partially_confirmed UniProt:O02260_CAEEL protein_id:CAB03101.3 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE36160 WBGene00009695 calpain-like protease status:Partially_confirmed UniProt:O02260_CAEEL protein_id:CAB03101.3| [wormORF-contam.fasta]
  • F44F1.3 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE36160 WBGene00009695 calpain-like protease status:Partially_confirmed UniProt:O02260 protein_id:CAB03101.3 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE36160 WBGene00009695 status:Partially_confirmed UniProt:O02260 protein_id:CAB03101.3 [wormpep246-ecoli-contam.fasta]
  • Uncharacterized protein OS=Caenorhabditis elegans GN=CELE_F44F1.3 PE=4 SV=3 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 646 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEALink to PubMed article]
    Biological Process: proteolysis [IEALink to PubMed article]
    Molecular Function: calcium-dependent cysteine-type endopeptidase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSPQEEELL ELIEKYNEDK YCTNMNWTIF LGDHENEKEA NEKFKSILED CQRSKSAFID  60
   61 KEFPHEPKSY MTFDEQSKVY GKYESWKTWL FPKIWRRITP PSTDVSSSLS VYNPLTFTAY 120
  121 EVFQRKVGDC GLVAALSAIS TKPEVIMNIF DSLQLSKYGV YKVKLFVDGQ WKTIIIDDYF 180
  181 PYTTDGIRIG ATSGYQIWAA LIEKALVKEC GNYKGIHGFQ SLSAFSALTG SPVLLIPVAK 240
  241 MFNNLRKYWK TLMEFRNNQY PMACGTLNRE VNGILPQHAY TIMDIVERDG HKLLLLRNPS 300
  301 GGSVWTRNWS KEWEWWPENM KDLLEGMIRG SFWISWDDFL NVFCSIYVCR HRSNWFAYYA 360
  361 KLVLKYPEDD AFPAIDIKVT EKCMVCISAV DDWISREVLL KTVEFQMPKY VQRYSWIAVH 420
  421 KINGIFSDNK KVVACEIIND STQDIDLEPG IYTITVIYLN DWSLDKRDIS IHSSRPISVN 480
  481 EGFSRTRKDS VHIKYIVDKF GQEIVKEQKD KMSIKKYTDN NFTFIAVVAW NFTYDQFLHA 540
  541 HLRYSITDEQ FVSRSLEDKQ TVDVIPPRRH QVLVVINLEA MPEIVDFPID IDYKLSKDVD 600
  601 ATINGIKRGC HLPEISSSRF LEYVHREEII SLDDFIPEIE VLSKLN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..646] PSI-BLAST 164.0 Calpain large subunit, C-terminal domain (domain IV); Calpain large subunit, middle domain (domain III); Calpain large subunit, catalytic domain (domain II)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.529663942126259 bayes_pls_golite062009
  • hydrolase activity
    		•  0.16837900182603 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle