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Protein Overview: sra-13

General Information:
Name(s) found: sra-13 / CE35877 [WormBase]
Description(s) found:
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  • WBGene00005039 locus:sra-13 Serpentine receptor class alpha-13 status:Partially_confirmed UniProt:Q20618 protein_id:CAE48504.1 [WormBase]
  • gi|71989915|ref|NP_001022187.1| Serpentine Receptor, class A (alpha) family member (sra-13) [Caenorhabditis elegans] [NCBI NR]
  • gi|37619862|emb|CAE48504.1| C. elegans protein F49E12.5b, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • [wormpep115.fasta]
  • Hypothetical protein F49E12.5b [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • CE35877 WBGene00005039 locus:sra-13 status:Partially_confirmed TR:Q7JM75 protein_id:CAE48504.1 [wormpep150.fasta]
  • 35877 WBGene00005039 locus:sra-13 status:Partially_confirmed TR:Q7JM75 protein_id:CAE48504.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • locus:sra-13 status:Partially_confirmed TN:CAE48504 protein_id:CAE48504.1 [wormpep115.fasta.reversed]
  • CE35877 WBGene00005039 locus:sra-13 status:Partially_confirmed UniProt:SRA13_CAEEL protein_id:CAE48504.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE35877 WBGene00005039 locus:sra-13 status:Partially_confirmed UniProt:SRA13_CAEEL protein_id:CAE48504.1| [wormORF-contam.fasta]
  • Serpentine Receptor, class A (alpha) family member (sra-13) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE35877 WBGene00005039 locus:sra-13 status:Partially_confirmed SW:Q20618 protein_id:CAE48504.1 [WormBase_C-elegans_wp180_08-19-2007_reversed.fasta]
  • CE35877 WBGene00005039 locus:sra-13 status:Partially_confirmed UniProt:Q20618 protein_id:CAE48504.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE35877 WBGene00005039 locus:sra-13 status:Partially_confirmed UniProt:Q20618 protein_id:CAE48504.1 Serpentine receptor class alpha-13 [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 174 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: sensory perception of chemical stimulus [IEALink to PubMed article]
    Molecular Function: transmembrane receptor activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATPSSTNSD ISTTQMAIIS SVNRTCASES LLELYRSYKY ILSTSFNIII PIISLFFLVY  60
   61 AIKQLCAQSI IQYSTRVLLI TTILFAVCHQ IAYFCFKADL LYTMLFKLDQ PCNLQHSSYD 120
  121 CRFITIATTT SNCGMALVQL AMSIDRVFAL KFNRVYYKLK SIPGITLALI TAVI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..174] FFAS03 2.68 Rhodopsin


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle