YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	sra-13
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATPSSTNSD ISTTQMAIIS SVNRTCASES LLELYRSYKY ILSTSFNIII PIISLFFLVY  60
   61 AIKQLCAQSI IQYSTRVLLI TTILFAVCHQ IAYFCFKADL LYTMLFKLDQ PCNLQHSSYD 120
  121 CRFITIATTT SNCGMALVQL AMSIDRVFAL KFNRVYYKLK SIPGITLALI TAVI

Type	Start	End	Confidence
Cytoplasmic	1	39	0.54
Transmembrane Helix	40	62	0.88
Non-Cytoplasmic	63	72	0.47
Transmembrane Helix	73	96	0.79
Cytoplasmic	97	174	0.55