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Protein Overview: snf-10

General Information:
Name(s) found: snf-10 / CE35652 [WormBase]
Description(s) found:
Found 15 descriptions.
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  • WBGene00004909 locus:snf-10 Transporter status:Partially_confirmed UniProt:O45915 protein_id:CAA16307.2 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 673 amino acids

    Gene Ontology:
    Cellular Component: integral to plasma membrane [IEALink to PubMed article]
    membrane [IEALink to PubMed article]
    Biological Process: neurotransmitter transport [IEALink to PubMed article]
    nematode larval development [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    growth [IMPLink to PubMed article]
    Molecular Function: neurotransmitter:sodium symporter activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSSDFKQL KQTRTKSEET TRSASNETVN DDNRSTTTEE IIPIKKTSNA TAISNIGFKS  60
   61 VTNLALENIG LDTKMEGPTW TSKWEAITAT LSFVTCSGNI WFFPYLCGYY GGWFPYQFTF 120
  121 CYVFIAVPLL YLETALGQYA SASPLSVFSR MAPAMAGLSA GMCFIMVFRT ISLSVWAIYD 180
  181 LTIFTHASQS IWSTSPWESC QESQSGDYCV NYKLSSKCTW IQPGSDKECD EYQEMLIATR 240
  241 GFQQRKSPFM SFVHGLMYKR SITMNDWEPP SVTSIICAVC LWIIIGIISI GGSKVLGRTG 300
  301 IVALTLLLVG TIMLLSYGMS LNDTTNVFTA FFYQSEGYED KWMWVWSWAD AAAHALRALN 360
  361 VGCGGIQKFA SLNNFHNKIH RDVLLISIVS FVFYICTGLL SFMFMAEIGR LYYPDLEASE 420
  421 RIQLYATPVM IESVISEILT NSSMGSIWVF LFWLTLAACS IQGISSYIWV ISSMIVERLN 480
  481 GSRRKYGKAL ASWHKRAIIL AIMSVTGLIS SLPFLGNGGI NLMSSIETFA SYGTIFIAFV 540
  541 EVITVSYVYG FKRFSVNIRA MIGGHGPPNV FWWLNWLVIS PILLIVTFGC IVATFGQKKA 600
  601 FNENSIVSDP IGYSLLVMPC IFVILYFLRD EYDRRKNMEP FVVMIRATGD WGPMNPEDRR 660
  661 NAVKFERQLR VRY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..673] PSI-BLAST 52.09691 Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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