| Protein: | snf-10 |
| Organism: | Caenorhabditis elegans |
| Length: | 673 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for snf-10.
| Description | E-value | Query Range |
Subject Range |
|
|
550.0 | [0..44] | [664..259] |
|
Region A: Residues: [1-673] |
1 11 21 31 41 51
| | | | | |
1 MASSSDFKQL KQTRTKSEET TRSASNETVN DDNRSTTTEE IIPIKKTSNA TAISNIGFKS 60
61 VTNLALENIG LDTKMEGPTW TSKWEAITAT LSFVTCSGNI WFFPYLCGYY GGWFPYQFTF 120
121 CYVFIAVPLL YLETALGQYA SASPLSVFSR MAPAMAGLSA GMCFIMVFRT ISLSVWAIYD 180
181 LTIFTHASQS IWSTSPWESC QESQSGDYCV NYKLSSKCTW IQPGSDKECD EYQEMLIATR 240
241 GFQQRKSPFM SFVHGLMYKR SITMNDWEPP SVTSIICAVC LWIIIGIISI GGSKVLGRTG 300
301 IVALTLLLVG TIMLLSYGMS LNDTTNVFTA FFYQSEGYED KWMWVWSWAD AAAHALRALN 360
361 VGCGGIQKFA SLNNFHNKIH RDVLLISIVS FVFYICTGLL SFMFMAEIGR LYYPDLEASE 420
421 RIQLYATPVM IESVISEILT NSSMGSIWVF LFWLTLAACS IQGISSYIWV ISSMIVERLN 480
481 GSRRKYGKAL ASWHKRAIIL AIMSVTGLIS SLPFLGNGGI NLMSSIETFA SYGTIFIAFV 540
541 EVITVSYVYG FKRFSVNIRA MIGGHGPPNV FWWLNWLVIS PILLIVTFGC IVATFGQKKA 600
601 FNENSIVSDP IGYSLLVMPC IFVILYFLRD EYDRRKNMEP FVVMIRATGD WGPMNPEDRR 660
661 NAVKFERQLR VRY
|
| Detection Method: |  |
| Confidence: | 52.09691 |
| Match: | 2a65A |
| Description: | Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters |
Matching Structure (courtesy of the PDB): |
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