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Protein Overview: sra-13

General Information:
Name(s) found: sra-13 / CE35552 [WormBase]
Description(s) found:
Found 20 descriptions.
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  • WBGene00005039 locus:sra-13 Serpentine receptor class alpha-13 status:Partially_confirmed UniProt:Q20618 protein_id:CAA91390.2 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 335 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: sensory perception of chemical stimulus [IEALink to PubMed article]
    Molecular Function: transmembrane receptor activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIISSVNRT CASESLLELY RSYKYILSTS FNIIIPIISL FFLVYAIKQL CAQSIIQYST  60
   61 RVLLITTILF AVCHQIAYFC FKADLLYTML FKLDQPCNLQ HSSYDCRFIT IATTTSNCGM 120
  121 ALVQLAMSID RVFALKFNRV YYKLKSIPGI TLALITLSIS FSMFFILTID DPLSGYVNHC 180
  181 GFYPTYSQDK FHIFLDVTLY LAVFNFVFDI GLMYYSYQEI LWKRSYSFVN RFQSRISLKC 240
  241 TQAIFIISIC QCISNVLYSG LLSLLMKLGR YMSSADYNLS LSLAYTTPYS CLILPILICK 300
  301 VLEYIKKQRT VGILSLRNQK QSMEGHMAMI NSAWK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..335] PSI-BLAST 46.39794 Rhodopsin


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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