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Protein Overview: ref-2

General Information:
Name(s) found: ref-2 / CE35437 [WormBase]
Description(s) found:
Found 17 descriptions.
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  • WBGene00004335 locus:ref-2 status:Confirmed UniProt:Q7JNM3 protein_id:CCD67554.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 315 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    intracellular [IEALink to PubMed article]
    Biological Process: locomotory behavior [IMPLink to PubMed article]
    hermaphrodite genitalia development [IMPLink to PubMed article]
    oviposition [IMPLink to PubMed articleLink to PubMed article]
    organ morphogenesis [IMPLink to PubMed article]
    Molecular Function: nucleic acid binding [IEALink to PubMed article]
    zinc ion binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIPANTIQK DKMMHSDYYT QSQGPTVEQQ PEWQASVQPY SDPHAYSPSF YMNMSQVPHF  60
   61 LPAQVDPFIY PNTLGSYGGD KQVQCLWETN GQVCMHVCQN SGELSTHISS NHITHDSKFV 120
  121 CLWKGCDREF KMFKAKYKLV NHMRVHTGER PFLCDVCNKV FARSENLKIH KRIHSGEKPF 180
  181 QCTHNGCTKL FANSSDRKKH MHVHSSHKPY SCMYPDCGKT YTHPSSLRKH TKVHENEKKS 240
  241 QLSPEHDESS DSGNASIGTP TTDESLTFSP ENIKRDQHLH TMHTFMDRPN PFMQMYQNQF 300
  301 SNPTYHMFMA KPDSY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..96] deduced N/A No confident structure predictions are available.
    2 View Details [97..165] PSI-BLAST 23.0 Five-finger GLI1
    3 View Details [166..315] PSI-BLAST 57.0 No description for 2i13A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle