| Protein: | ref-2 |
| Organism: | Caenorhabditis elegans |
| Length: | 315 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ref-2.
| Description | E-value | Query Range |
Subject Range |
|
|
512.0 | [0..2] | [314..2538] |
|
Region A: Residues: [1-96] |
1 11 21 31 41 51
| | | | | |
1 MSIPANTIQK DKMMHSDYYT QSQGPTVEQQ PEWQASVQPY SDPHAYSPSF YMNMSQVPHF 60
61 LPAQVDPFIY PNTLGSYGGD KQVQCLWETN GQVCMH
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [97-165] |
1 11 21 31 41 51
| | | | | |
1 VCQNSGELST HISSNHITHD SKFVCLWKGC DREFKMFKAK YKLVNHMRVH TGERPFLCDV 60
61 CNKVFARSE
|
| Detection Method: | |
| Confidence: | 23.0 |
| Match: | 2gliA |
| Description: | Five-finger GLI1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [166-315] |
1 11 21 31 41 51
| | | | | |
1 NLKIHKRIHS GEKPFQCTHN GCTKLFANSS DRKKHMHVHS SHKPYSCMYP DCGKTYTHPS 60
61 SLRKHTKVHE NEKKSQLSPE HDESSDSGNA SIGTPTTDES LTFSPENIKR DQHLHTMHTF 120
121 MDRPNPFMQM YQNQFSNPTY HMFMAKPDSY
|
| Detection Method: | |
| Confidence: | 57.0 |
| Match: | 2i13A |
| Description: | No description for 2i13A was found. |
