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Protein Overview: CE34961

General Information:
Name(s) found: CE34961 [WormBase]
Description(s) found:
Found 15 descriptions.
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  • WBGene00011161 locus:chil-18 status:Partially_confirmed UniProt:Q21861 protein_id:CAA93865.2 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 429 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: carbohydrate metabolic process [IEALink to PubMed article]
    chitin catabolic process [IEALink to PubMed article]
    Molecular Function: chitinase activity [IEALink to PubMed article]
    hydrolase activity, hydrolyzing O-glycosyl compounds [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAKHEYNKL SLVHLPRKEV HSEKRIPSIL TRTIAVLFVF ALLALVSIGS EGVPQLRNSR  60
   61 DLTKSPCKKR VVGYYSEWEG TEITRSQLGK LTHAVFAFIH MDSEGKLQFK TNQKERFEKL 120
  121 KTAVKNANSD TKVMISIGGD HNSENFGSVL SDSEKKSMFI DSIARFIRQH KIHGVDIYWK 180
  181 WLGNSETEHH DFPSFLKDLK EKLKTVRDDS IISIVAPQAK MDRRHDGYKF DDFMEYIDFV 240
  241 NVFSMDYYGP WPNQWGTPTG PSAPLYGGIG VKKHFNVDST MKYYTCMTED PSKFNMVIPF 300
  301 YVRLWKNVKE PISSGTEVFR RADLKNGAAV GNSYMSRWTV DHEGWELTPA LWDDVTKTPY 360
  361 VWNQETGNFL TFENKKSIEA KLAYAIEHNL GGVWIHLVDK DNENEELLRA VASKKFCASE 420
  421 SENKVTYDC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..429] PSI-BLAST 88.0 Crystal Structure of S. Marcescens Chitinase A Mutant W167A

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • chitinase activity
    		•  6.40555694403866 bayes_pls_golite062009
  • hydrolase activity, hydrolyzing O-glycosyl compounds
    		•  1.91170236789651 bayes_pls_golite062009
  • amylase activity
    		•  1.38959979746158 bayes_pls_golite062009
  • hydrolase activity, acting on glycosyl bonds
    		•  1.34796838721403 bayes_pls_golite062009
  • chitin binding
    		•  1.29046765706168 bayes_pls_golite062009
  • binding
    		•  0.931465888895274 bayes_pls_golite062009
  • growth factor activity
    		•  0.803631304661827 bayes_pls_golite062009
  • glucosidase activity
    		•  0.766503513427695 bayes_pls_golite062009
  • receptor binding
    		•  0.607116029438976 bayes_pls_golite062009
  • catalytic activity
    		•  0.534516847146079 bayes_pls_golite062009
  • carbohydrate binding
    		•  0.4998423581103 bayes_pls_golite062009
  • transferase activity, transferring hexosyl groups
    		•  0.266938437560648 bayes_pls_golite062009
  • hexosaminidase activity
    		•  0.21148675734804 bayes_pls_golite062009
  • hydrolase activity
    		•  0.178746202646272 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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