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Protein Overview: CE34714

General Information:
Name(s) found: CE34714 [WormBase]
Description(s) found:
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  • WBGene00016174 status:Partially_confirmed UniProt:Q7YZG1 protein_id:CCD65891.1 [WormBase]
  • gi|71983075|ref|NP_001021998.1| hypothetical protein C27H5.4 [Caenorhabditis elegans] [NCBI NR]
  • gi|32699226|gb|AAP86617.1| Hypothetical protein C27H5.4b [Caenorhabditis elegans] [NCBI NR]
  • [wormpep111.fasta]
  • Hypothetical protein C27H5.4b [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • CE34714 WBGene00016174 status:Partially_confirmed TR:Q7YZG1 protein_id:AAP86617.1 [wormpep150.fasta]
  • 34714 WBGene00016174 status:Partially_confirmed TR:Q7YZG1 protein_id:AAP86617.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • status:Partially_confirmed TR:Q7YZG1 protein_id:AAP86617.1 [wormpep115.fasta.reversed]
  • CE34714 WBGene00016174 status:Partially_confirmed UniProt:Q7YZG1_CAEEL protein_id:AAP86617.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE34714 WBGene00016174 status:Partially_confirmed UniProt:Q7YZG1_CAEEL protein_id:AAP86617.1| [wormORF-contam.fasta]
  • C27H5.4b [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE34714 WBGene00016174 status:Partially_confirmed UniProt:Q7YZG1 protein_id:AAP86617.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE34714 WBGene00016174 status:Partially_confirmed UniProt:Q7YZG1 protein_id:CCD65891.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
    • Organism: Caenorhabditis elegans
    Length: 517 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEALink to PubMed article]
    Biological Process: sodium ion transport [IEALink to PubMed article]
    nematode larval development [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    growth [IMPLink to PubMed article]
    reproduction [IMPLink to PubMed article]
    Molecular Function: transporter activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLLHMPTLN LVLTVVGAGF ILSIQSLYYI KVFFDEFHLP PSYLKVVQIL FLVWNAVNDP  60
   61 MMGYMQDLGF CGMKWIMDRR KVVLYAGPVF AASFLLFWFP WSTSIGWVTA LHLLVSLFIY 120
  121 DTLLTLVLSA YCGLCVENSR SHEDRVRVIV YGEIFTIVAG LLIYPLETMP HTNEHYWLFQ 180
  181 LCCVVIACIS AALMAFSGYH LKVERPINED HQLEKFQEGE VVKETKQDGW KNALTVSLQI 240
  241 AKEPRFICLV GAQFFRILRF IANENFLIVF TEGLLVNNGF FEKNSGSLGL FYVLARSSGS 300
  301 VSRFFLICEH DQFQILFLLL WVPTNRFGTQ AVIQSLNILS IFNVIFILYA GVNNITAIAI 360
  361 FIILENAISR CGWQGFYIVV AGEVVDTDMK TNNRKTPFST IIFTLKALFN KPADQLAPVF 420
  421 VLSLFLERGG YPQLTVPCQQ FYEDNYSNST MFNSTSMEST TLSGYPTVAE CTNYSQWMFL 480
  481 ALAIFPAICA IGESMFVAFD QYWRRHIKGK TGHLGDD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..517] PSI-BLAST 26.0 Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.795545041075205 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle